| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3711 |
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| Symbol | |
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| ID | 3972334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4131017 |
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| End bp | 4131541 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926821 |
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| Product | peptidase A24A, prepilin type IV |
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| Protein accession | YP_533565 |
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| Protein GI | 90425195 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.134151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTCG ATCTGCTGCG GGTTCTGCTG TTCCCGGCGC TGATGGCCTT CGCGGCGGCC
AGCGACCTGT TCACCATGAC GATTTCCAAC CGCGTCTCGC TGCTGCTGAT CGTCGGGTTC
CTGGCATTGG CCGGCCTCGG CGGCATGGGC TTGCAGGAAA TTCTCTCGCA TATCGCCGCC
GGCGGCAGCG TTCTGGCAAT CGCCTTTGCC TGCTTCGCGT TCGGCTGGGT GGGCGGCGGC
GACGCCAAAG TGGCCTCGGC CGCAGCATTG TGGTTCGGCT TCGACCACCT GCTCGAATAT
CTGGTCTACG CCTCGCTGTT CGGCGGCGCG CTGACCCTGC TGCTGCTGCA GTTCCGGCAA
TGGCCGTTGC CCTACGCGCT GTGCGGTCAA CCCTGGCTGC TGCGGCTGCA TGCCAAGGAG
ACCGGCATTC CTTACGGCAT CGCGCTGGCC ACCGGCGCGC TGATGATCTA CCCGGAAACC
GAATGGATCC GCGCCGTCGA CCTCGCGCAC TTCGCCATCT ACTGA
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| Protein sequence | MMLDLLRVLL FPALMAFAAA SDLFTMTISN RVSLLLIVGF LALAGLGGMG LQEILSHIAA
GGSVLAIAFA CFAFGWVGGG DAKVASAAAL WFGFDHLLEY LVYASLFGGA LTLLLLQFRQ
WPLPYALCGQ PWLLRLHAKE TGIPYGIALA TGALMIYPET EWIRAVDLAH FAIY
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