| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3706 |
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| Symbol | |
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| ID | 3972329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4128252 |
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| End bp | 4128896 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637926816 |
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| Product | TadE-like |
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| Protein accession | YP_533560 |
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| Protein GI | 90425190 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4961] Flp pilus assembly protein TadG |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGTCA ATCCGATGAA GACGCTGGCA TTGTCAGAAT TGTTTTATGG GTTTGAGCGA
CAGCTCGGAA GACTGCGCCG CGACACCTCC GGTCTGGCGG CGGTCGAGTT CGTCATGATC
GTGCCGCTGA TGCTGGTGAT GTTCTTCGGC ACCATCGAGC TTTCGTCGGG GTTCGCGGCC
CATCGCAAGG TTTCGATCGT CGCGCAAACC ATCTCCGATC TGACCTCGCG CGGCAAGTCG
GCGGCCGCGA CCGACGTGAG TAACTTCTTG AGCATCGCCG ATGCGATCAT GACGCCGTAT
CCCGCGGTGC ATTCCGCCGA TCAATTCCAG ACCACGATTA CCGAGGTCTA TATCGATCCG
GCGACCGGCA TCGGCCACGC GCAATGGAGC CGGGGAGACG CGGTCCGGAA TGCCGGAAGC
GTCGTCGCCG TGCCGGCCGA TCTGGTTGCC AAGGACTCGT CGAACAACGT GATCGCCGGT
CAGTACCTGA TCTTTAGCGA GGTCAAGTAT CTGTATAAGC CGATCGTGGG TTACCTGCTG
GCCAAGGCGG GCATCTGGCT GACGGACCAG ACCTTCACAC GGCCGCGGCA ATCGAGCTGC
GTGTTGTGGA CGGGCGAAAC GCTGTGCCCG ACCCGGGTGT CCTGA
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| Protein sequence | MMVNPMKTLA LSELFYGFER QLGRLRRDTS GLAAVEFVMI VPLMLVMFFG TIELSSGFAA
HRKVSIVAQT ISDLTSRGKS AAATDVSNFL SIADAIMTPY PAVHSADQFQ TTITEVYIDP
ATGIGHAQWS RGDAVRNAGS VVAVPADLVA KDSSNNVIAG QYLIFSEVKY LYKPIVGYLL
AKAGIWLTDQ TFTRPRQSSC VLWTGETLCP TRVS
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