| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3703 |
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| Symbol | |
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| ID | 3972326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4125896 |
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| End bp | 4127341 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637926813 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_533557 |
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| Protein GI | 90425187 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.621227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGAA CCAACCTTTT GACCTCCTTT CAGGATTTCG GCCTGGCCGA AGCTATTACG
CGTGCGCTTA AAGAAGAAAA TTACCTGACC CCGACGCCGA TTCAGGCTCA AACCATTCCC
CTTGCTATGG CTGGCCGCGA CGTCGTCGGC ATCGCCCAGA CCGGCACCGG CAAGACCGCC
TCCTTCGCGC TCCCGATCAT CCACCGCCTG TTGGAAAACC GCATCAAGCC GCAGCCGAAG
ACCTGCCGCG TGCTGGTGCT GAGCCCGACC CGCGAACTCT CCGGTCAGAT CCTGGAGAGC
TTCAACGCCT ATGGCCGTCA CGTCCGCTTG ACCTCGGCGC TAGCGATCGG CGGCGTGCCG
ATGGGCCGCC AGGTCCGCTC GATCATGCCG GGCCTCGACG TGCTGGTGGC GACGCCGGGC
CGACTGCTCG ACCTCGTGCA GACCAATGCG CTGAAGCTCA ATCAGGTCGA GTTTCTGGTG
CTCGACGAAG CCGACCGCAT GCTCGACATG GGCTTCATCA ACGACATCCG CAAAATCGTC
GCCAAGCTGC CGATCAAGCG GCAGACGCTG TTCTTCTCGG CCACCATGCC GAAGGACATC
GCCGACCTCG CCGACCAGAT GCTGCGCGAT CCGGCGCGGG TCGCCGTGAC CCCGGTGGCC
TCCACCGTGG AACGCATCAC CCAGCGCATC ATCCAGGTCG ACCATTCCGC CAAGCCGACC
CTGCTGGCGC AGATCCTCAA GCAAGAGAAC GTCAACCGGG CGCTGATCTT CACCCGCACC
AAGCATGGCG CGGACAAGGT CGTGAAGGGC CTGGCGCGCG CCGGCATCAC CGCCGACGCG
ATCCACGGCA ACAAGTCGCA GAACCACCGC GAGCGCGTGC TGGCGGCGTT CCGCGCCGGT
GAAATCCGCA CTCTGGTTGC TACCGACATC GCCGCCCGCG GCATCGACGT CGACGGCATC
ACCCATGTGG TGAATTTCGA TCTGCCGAAC ATTCCGGAGA CCTACGTCCA TCGCATCGGC
CGCACCGCGC GCGCCGGCGC CGAGGGCATC GCGATCTCGC TGGTCGCCGG CGAAGAGATG
GCGTTCCTGC GCGACATCGA GAAGCTGATC CGCATCACCC TGCCGCGCGA AGATCGCCGC
ACCCCCGGGC ATCGCGATAC CGTGGCGAAG GTATCGCAGC ATCGCGGCGC CCATGCCGCG
CCGCACGTGC ATTCGCCGCG CAGCAATGAG GTCGCGCCAT CGTCGAACGG CCCGCGTCGC
CGGCGTCGGC CGACCGGTGG TACTATCGCC GCCCCAGTCG CCCGGCATGA ACCGAGCCGG
CACGAACCCA CCGCCCGCCC GCAGCCGCAG GCGGCTGCCA AGGAAGGCAT CCAGGGCGTG
GCTTTCCTGC ATCGCGAAAG CCGCCCCGGA ACCCAACCCA ACCGCAAACA AAGACCGCAG
CGCTGA
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| Protein sequence | MERTNLLTSF QDFGLAEAIT RALKEENYLT PTPIQAQTIP LAMAGRDVVG IAQTGTGKTA
SFALPIIHRL LENRIKPQPK TCRVLVLSPT RELSGQILES FNAYGRHVRL TSALAIGGVP
MGRQVRSIMP GLDVLVATPG RLLDLVQTNA LKLNQVEFLV LDEADRMLDM GFINDIRKIV
AKLPIKRQTL FFSATMPKDI ADLADQMLRD PARVAVTPVA STVERITQRI IQVDHSAKPT
LLAQILKQEN VNRALIFTRT KHGADKVVKG LARAGITADA IHGNKSQNHR ERVLAAFRAG
EIRTLVATDI AARGIDVDGI THVVNFDLPN IPETYVHRIG RTARAGAEGI AISLVAGEEM
AFLRDIEKLI RITLPREDRR TPGHRDTVAK VSQHRGAHAA PHVHSPRSNE VAPSSNGPRR
RRRPTGGTIA APVARHEPSR HEPTARPQPQ AAAKEGIQGV AFLHRESRPG TQPNRKQRPQ
R
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