| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3702 |
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| Symbol | |
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| ID | 3972325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4124095 |
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| End bp | 4125414 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637926812 |
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| Product | branched-chain amino acid uptake ABC transporter periplasmic solute-binding protein precursor |
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| Protein accession | YP_533556 |
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| Protein GI | 90425186 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTACTG AACCGAAGCA ATCGAAGGCT GTGCCGATCA GTCGGCGGCG CTGGCTGGCA
GCGAGCGCCG GGCTGATGCT TGGCTTGGCC ACGTTCAGCT CCGCGAAAGC CGAGGACACC
ATCAAGGTCG GTGTCCTGCA CTCGCTGTCG GGGACGATGG CGATCAGTGA AACCACGTTG
AAAGACACCA TTCTCTTCCT GATCGACGAG CAGAACAAGA AGGGCGGCGT GCTCGGCAAG
AAGCTCGAGG CCGTGGTGGT CGATCCGGCG TCGAACTGGC CGCTGTTCGC CGAGAAGGCT
CGCGAGCTGA TCACCAAGGA CAAGGTGTCC GTGGTGTTCG GCTGCTGGAC CTCTGTGTCG
CGCAAGTCGG TGCTGCCGGT GTTCAAGGAA TTGAACTCGA TCCTGTTCTA CCCGGTGCAG
TATGAAGGCG AGGAATCCGA GCGCAACGTG TTCTACACCG GCGCCGCCCC GAACCAGCAG
GCGATCCCGG CGGTCGACTA TCTGATGAAA GACGAGAAGG TGAAGCGCTG GGTGCTGGCC
GGCACCGACT ACGTCTATCC GCGCACCACC AACAAGATTC TCGAAGCCTA CTTGAAGTCG
AAGGGCGTCA AGTCCGAAGA CATCATGATC AACTACACGC CGTTCGGTCA TAGTGATTGG
CAGACCATCG TCGCCGACAT CAAGAAGTTC GGCTCCGCCG GCAAGAAGAC CGCGGTGGTT
TCCACCATCA ACGGCGACGC CAACGTGCCG TTCTACAAGG AGCTCGGCAA CCAGGGCATC
AAGGCCACCG ACATTCCGGT GGTGGCGTTC TCGGTCGGCG AAGAAGAACT CGCCGGCATC
GACACCAAGC CCTTGGTCGG CCATCTCGCC GCCTGGAACT ACTTCCAGTC GATCAAGACC
CCGGAGAACG AGAAGTTCAT CAAGGCCTGG CAGGCCTATA CCAAGAACCC GAAGCGCGTG
ACCAACGACC CGATGGAAGC CCACGTCATC GGCTTCGACA TGTGGGTCAA GGCGGTCGAG
AAGGCCAAGT CGGTCGACGC CGACAAGGTG ATCGACGCGC TGCCCGGCAC CGAGGCCAAG
AACCTCACCG GCGGCACCTC GAAGATGCTG CCGAACCATC ACATCACCAA GCCGGTGTTC
ATCGGCGAGA TCAAGGCCGA CGGCCAGTTC GACGTGGTGT GGAAGACCCC CGGCCTGGTG
GCCGGCGACG CCTGGTCGAA GGAGCTCGAA GGCTCCAAGG ATCTGATCGG CGATTGGGTC
GGCAAGAAGT GCGGCAACTA CAACACCAAG ACCAACAAGT GCGGCGGGCA GGGCTCCTGA
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| Protein sequence | MLTEPKQSKA VPISRRRWLA ASAGLMLGLA TFSSAKAEDT IKVGVLHSLS GTMAISETTL
KDTILFLIDE QNKKGGVLGK KLEAVVVDPA SNWPLFAEKA RELITKDKVS VVFGCWTSVS
RKSVLPVFKE LNSILFYPVQ YEGEESERNV FYTGAAPNQQ AIPAVDYLMK DEKVKRWVLA
GTDYVYPRTT NKILEAYLKS KGVKSEDIMI NYTPFGHSDW QTIVADIKKF GSAGKKTAVV
STINGDANVP FYKELGNQGI KATDIPVVAF SVGEEELAGI DTKPLVGHLA AWNYFQSIKT
PENEKFIKAW QAYTKNPKRV TNDPMEAHVI GFDMWVKAVE KAKSVDADKV IDALPGTEAK
NLTGGTSKML PNHHITKPVF IGEIKADGQF DVVWKTPGLV AGDAWSKELE GSKDLIGDWV
GKKCGNYNTK TNKCGGQGS
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