| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3700 |
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| Symbol | |
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| ID | 3972323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4120976 |
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| End bp | 4122145 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637926810 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_533554 |
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| Protein GI | 90425184 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.845497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGC ATATCCTCAC CCGCACCCTC GACCGCAGCG CCACCATCTT CCTCGTCATC
GTCGCCGCGG TGGGCATCTT GCTGCCGCTG GCGAATCTGC TGTTTCCGGA AGGTTCGGCG
TTGCACGTGC CGACTTATCT GATGGCGCTG TTCGGCAAAT ACGTCTGCTA CGCGCTCTTG
GCGCTGTCGA TCGATCTGAT CTGGGGCTAT TGCGGCATTC TCTCGCTCGG CCACGGCGCA
TTCTTCGCGC TCGGCGGCTA CGCCATGGGG ATGTATCTGA TGCGCCAGAT CGGCTCCCGC
GGCGTCTACG GCAATCCCGT GTTGCCCGAT TTCATGGTGT TCCTGAATTA CAACGAACTG
CCATGGTACT GGTACGGCTT CGACATGTTC TGGTTCGCCG CCCTGATGGT GCTGGTGGTG
CCGGGCCTGC TCGCCTTCGG CTTCGGCTGG CTGGCGTTCC GCTCCCGCGT CACCGGCGTC
TATCTCTCGA TCATCACCCA GGCGATGACC TACGCGCTGC TGCTGGCGTT CTTCCGCAAC
GATTTCGGCT TCGGCGGCAA TAACGGCCTG ACCGATTTCA AGGACATTCT GGGCTTCAAC
GTGCAGGCCG ACGGCACCCG CGCCGCCTTG TTCGCGCTGA GTTGTCTGGC GCTGGCGCTG
GGCTTTCTGA TCTGCCGCGC GGTGGTGACC TCGAAGCTCG GCAAGGTGCT GATCGCGATC
CGCGACGCCG AGTCGCGCAC GCGCTTCCTC GGCTATCGCG TGGAATCCTA CAAGTTGTTC
GTGTTCACGC TGTCGGCCTG CATGGCCGGC GTCGCCGGCG CGCTCTACGT GCCGCAGGTC
GGCATCATCA ATCCCGGCGA ATTCGCGCCG GGCAATTCGA TCGAGGCGGT GATCTGGGTC
GCGGTCGGCG GCCGCGGCAC GCTGATCGGC GCGGCGCTCG GCGCCGTGGT GGTCAACTAC
GCGAAAACCG TGTTCACCTC GGGGCCGCTC GCGCCATACT GGCTGTTCAT GCTGGGCGCG
CTGTTCATCC TGGTGACGCT GCTGCTGCCG AAGGGCATCA TCGGCACCTT CAACGCCTGG
TGGGAGCCGT GGAAGGCCAA GCGCGACAAC GCTAATGCGG AGAGTGCCGC GCGCGAAGAC
GGCGTGATCG AACCGAAGCT GGCGGAGTGA
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| Protein sequence | MTPHILTRTL DRSATIFLVI VAAVGILLPL ANLLFPEGSA LHVPTYLMAL FGKYVCYALL
ALSIDLIWGY CGILSLGHGA FFALGGYAMG MYLMRQIGSR GVYGNPVLPD FMVFLNYNEL
PWYWYGFDMF WFAALMVLVV PGLLAFGFGW LAFRSRVTGV YLSIITQAMT YALLLAFFRN
DFGFGGNNGL TDFKDILGFN VQADGTRAAL FALSCLALAL GFLICRAVVT SKLGKVLIAI
RDAESRTRFL GYRVESYKLF VFTLSACMAG VAGALYVPQV GIINPGEFAP GNSIEAVIWV
AVGGRGTLIG AALGAVVVNY AKTVFTSGPL APYWLFMLGA LFILVTLLLP KGIIGTFNAW
WEPWKAKRDN ANAESAARED GVIEPKLAE
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