Gene RPC_3693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3693 
Symbol 
ID3971666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4117060 
End bp4117452 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content59% 
IMG OID637926803 
ProductPilT protein-like 
Protein accessionYP_533547 
Protein GI90425177 
COG category[R] General function prediction only 
COG ID[COG5611] Predicted nucleic-acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCGA TCGATACCAA TGTCTTGCTA CGTTTCTTCG AGGCGGATGA CAACGCCGCT 
CAGACCACTG CGGCGCGGGA CATGGTTCGA TCGCAAGGCA GCGTCTTTAT CAATCCGGTG
GTGCTGGTGG AATTCGTCTG GGCGTTGCGC GCGTCGTTCG GGCTCGATCG AAAAGCGATC
CATGCGCGAT TGCAGCGCAT TGTTGCGGCT CCGGAGTTCG TCCTGCCGTT TGCCCCGTCG
ATCGAGCGCG CGGTGGAGCA ATACGGCAAA GGGCTTGCCG ACTTTGCCGA CTGTATGATC
GGTGAACTCA ACCTCGCCTT CGGATGCGAT GCGACCATGA CATTCGACAA GAAGGCCGCC
AAAACCCTGC CATTCCGGTC GCTGAAAACC TAG
 
Protein sequence
MIAIDTNVLL RFFEADDNAA QTTAARDMVR SQGSVFINPV VLVEFVWALR ASFGLDRKAI 
HARLQRIVAA PEFVLPFAPS IERAVEQYGK GLADFADCMI GELNLAFGCD ATMTFDKKAA
KTLPFRSLKT