| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3676 |
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| Symbol | |
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| ID | 3969613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4090514 |
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| End bp | 4092316 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637926786 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_533530 |
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| Protein GI | 90425160 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCTGCAC GAATCGAAGA TTATGCACTG ATCGGCGATT GCGAAACCGC AGCCTTGGTC
GGCCGCGATG GCTCGATCGA CTGGCTGTGC TGGCCGTCGT TCGATTCGGA GGCCTGCTTT
GCCGCGTTGC TCGGCAGCAA TCAGCACGGC CGCTGGCAGA TCGCACCGGC CGACGCGATC
ACCGCCAGCT CGCGGCGCTA CCGTGGCGAC ACGCTGATCC TGGAAACCCG GCTGCAGACC
GCGACCGGCG TTGTCACCCT GATCGACTTC ATGCCGCCGC GCGGCAGCGC GTCCGACGTC
GTGCGCTTGG TACGCGGCGA GCAGGGCCGC GTGAAGCTGC GCATGGAGCT GGTGATCCGC
TTCGGCTTCG GCGTCAACAT TCCATGGGTG AAACGCACCG ACGGCGGCGC GCTGCTGGCG
ATCTGCGGTC CCGACATGGC GGTGCTGCGC AGCTCGGTCG AGACCCACGG CGAGGCCATG
ACCACGGTGT CGGAGTTCGA GGTCGCGGCC GGCGAGACCG CATCGTTCGT GCTGGCCTAT
GCGGCGTCGC ATTTGGCGGT GCCGGAACCG ATCGACGCCG AGCAGGCGCT CGCCGACACC
GAACAATTCT GGGCGGAGTG GTCGGGCCGC TGCACCTATC ACGGCGGCGA CCGCGACCTG
GTGATGCGCT CCTTGATCAC GCTGAAGGCG CTGACCTTCG CGCCGAGCGG CGGCATCGTC
GCGGCCCCCA CCACTTCGCT GCCGGAGAAA CTCGGCGGCG CCCGCAATTG GGACTATCGC
TATTGCTGGC TGCGCGACGC CACCTTCACG CTGCTGGCGC TGATCAATTC CGGCTACACC
GAGGAGGCCT CGGCCTGGCA CAATTGGCTG TTGCGCGCGG TGGCCGGCGC GCCGGCCGAC
ATGCAGATCA TGTACGGCAT CATGGGGCAG CGCCGGCTGC TGGAATGGCA GGCCGACTGG
CTGCCGGGCT ATGAGGGCGC TGCGCCGGTG CGGATCGGCA ACGCCGCGCA CGCGCAATTG
CAGCTCGACG TCTATGGCGA GCTGATCGAC GCGTTCCATC AGTGGCGGGT GGCGGACATC
ATGCTCGATG GCGAGTCGTG GTCGCTGGAA TGCGCTGTGC TGGAGCATCT TGCGAAGATC
TGGAACGAGC CCGATAGCGG CATCTGGGAG CTCCGCGGCC CCGGCCGGCA CTACGTCTCC
TCAAAGGTGA TGACCTGGGT GGCGTTCGAC CGCGGCATCA AGAGCGCGGA AATGTTCGGC
CTCGACGGAC CGCTCGCGCA ATGGCGGGCG CTACGCGACG AGATCCATCG CGACATCTGC
GCCAACGGCT TCGACAAAGA GCAGAACTGC TTCGTGGTGT CCTACGGCGC CAAGATGCTG
GACGCGTCGA TCCTGCTGTT GCCCTCGGTC GGTTTCCTGC CGGCGTCGGA TCCGCGGGTG
CAGGGCACGC TCAAAGCGAT CGAGCGGCAT CTGATGCGCG ACGGCTTCGT GCTGCGCCAC
GATCCGCGCG AGGTGACGGA TGAAAAGCAG CCGATCGAGG GTGCGTTCCT GGCCTGCAGC
CTGTGGCTGG CCGACGCCTA TCTGCTGGCC GGCGAAATCG GCAAGGCGAA GGCGCTGTTC
GACCGCGTCG CCGCGGTGGC CAACGATGTC GGCTTGCTCG CCGAAGAATA TGATTCCGAA
GCCAAGCGGC AGACCGGCAA TTTCCCGCAG GCGCTGACCC ACATCGCGCT GATCAACACC
GCGCAGAATC TGTCGGCCGT GCAGCAGCCC GCCGACAAGC CGGTGACGCA GCGCGCGAAG
TAA
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| Protein sequence | MPARIEDYAL IGDCETAALV GRDGSIDWLC WPSFDSEACF AALLGSNQHG RWQIAPADAI
TASSRRYRGD TLILETRLQT ATGVVTLIDF MPPRGSASDV VRLVRGEQGR VKLRMELVIR
FGFGVNIPWV KRTDGGALLA ICGPDMAVLR SSVETHGEAM TTVSEFEVAA GETASFVLAY
AASHLAVPEP IDAEQALADT EQFWAEWSGR CTYHGGDRDL VMRSLITLKA LTFAPSGGIV
AAPTTSLPEK LGGARNWDYR YCWLRDATFT LLALINSGYT EEASAWHNWL LRAVAGAPAD
MQIMYGIMGQ RRLLEWQADW LPGYEGAAPV RIGNAAHAQL QLDVYGELID AFHQWRVADI
MLDGESWSLE CAVLEHLAKI WNEPDSGIWE LRGPGRHYVS SKVMTWVAFD RGIKSAEMFG
LDGPLAQWRA LRDEIHRDIC ANGFDKEQNC FVVSYGAKML DASILLLPSV GFLPASDPRV
QGTLKAIERH LMRDGFVLRH DPREVTDEKQ PIEGAFLACS LWLADAYLLA GEIGKAKALF
DRVAAVANDV GLLAEEYDSE AKRQTGNFPQ ALTHIALINT AQNLSAVQQP ADKPVTQRAK
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