| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3656 |
|---|
| Symbol | |
|---|
| ID | 3972028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 4071802 |
|---|
| End bp | 4072548 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637926766 |
|---|
| Product | resolvase-like protein |
|---|
| Protein accession | YP_533510 |
|---|
| Protein GI | 90425140 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAACA AGTTTAAGTT CGTCGCCTAC TATCGAGTGT CAACCCGAAA GCAGGGTGTT
TCCGGACTTG GTATCGAGGC GCAGCGGGCA GCTGTTGTGG GATACCTGAA GGACAGCACC
GCCAATGTCG TTGCTGAATT CATCGAGATT GAGAGTGGGC GGAGGCATGA CAGGCCGGCG
CTTGAGCAGG CATTGGCAAC AGCCCGTATT CATCGTGCGG CGCTTGTTGT GGCAAAGGTA
GATCGGCTTA CTCGCTCCGT CGGCTTTCTA TCGAAGCTCC TTGAAGCGGG CGTTGATGTC
AGGTTCGCCG ACCTGCCAGC CATCGAGGGC CCCACCGGCC GGTTTATGCT TCAGCAGATG
GCGGCGGTGG CCGAACTGGA GGCCGGTCTT ATTTCGTCAC GCACGAGGGC TGCGCTTTCG
GCCGCAAAGG CACGCGGACA GAAGCTTGGC GGCAACCGGG GCGTCATCAT GTCACAGCAT
GCACAAGCAG AGGGCCGAAT GATGCAGGCG AACCGCGCCA AGGAGCGTGC TGCCGACCTT
GCCCCACTTC TTGATGAGCT TCGTAGGGCT GGCTTAACTT CGGCGACCGG CCTTGCCAAA
GAACTCACGA ACCGCTGCAT CCCCACCGCT CGTGGCGGCA AGGGGTGGTC CGCTTTGCAG
GTGATCCGCG TAATAGCCAA GATGCGGTCT GGTCACCTGC CACAGTTCCA TCTACTGCAA
GAAGGACTTG TTCGTAACCT CGAATAG
|
|---|
| Protein sequence | MVNKFKFVAY YRVSTRKQGV SGLGIEAQRA AVVGYLKDST ANVVAEFIEI ESGRRHDRPA
LEQALATARI HRAALVVAKV DRLTRSVGFL SKLLEAGVDV RFADLPAIEG PTGRFMLQQM
AAVAELEAGL ISSRTRAALS AAKARGQKLG GNRGVIMSQH AQAEGRMMQA NRAKERAADL
APLLDELRRA GLTSATGLAK ELTNRCIPTA RGGKGWSALQ VIRVIAKMRS GHLPQFHLLQ
EGLVRNLE
|
|---|
| |