| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3648 |
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| Symbol | |
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| ID | 3972019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4057774 |
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| End bp | 4059573 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637926757 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_533502 |
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| Protein GI | 90425132 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.458648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGC CGGTGACCGG GCGCAAGCTG CGCTCCAGCG AATGGTTCAA TGACCCTCAC
AATCCGGCGA TGACCGCGCT CTATCTGGAG CGCTATCTGA ACTACGGACT GACACGCAAA
GAGCTGCAGG CCGGCAAGCC GATCATCGGC ATCGCGCAGA CCGGCAACGA TTTGTCGCCG
TGCAACAGGC ATCACCTGGA ACTGGCGCAG CGGGTGCGCG AGGGCATCCG CGAGGCCGGC
GGCATCGCGA TGGAATTCCC GATGCACCCG ATCCAGGAAA CCGGCAAGCG GCCGACCGCG
GCGCTCGACC GCAACCTGGC CTATCTCGGG CTGGTCGAAA TCCTGTTCAG CTACCCGCTC
GACGGCGTGG TGCTGACCAC CGGCTGCGAC AAGACCACCC CGGCCTGCCT GATGGCGGCG
GCGACCGTCA ACCTGCCGGC GATCGTACTG TCCGGCGGGC CGATGCTGAA CGGCTGGCAC
GAGGGCGAGC GCACCGGCTC CGGCACGGTG ATCTGGAAAT CCCGCGAGCG GATGGCCGCG
GGCGAGATCG ACTACGAGGA ATTCATGGAC ATCGTCGCCT CCTCGGCGCC CTCGGTCGGC
CATTGCAACA CCATGGGCAC GGCGTCGACG ATGAATGCGC TGGCGGAAGC GCTGGGGATG
TCGCTGCCCG GCTGTGCCGC GATCCCGGCG CCCTATCGCG AACGCGGCCA GATCGCTTAT
CAGACCGGTT TGCGCGCGGT GCAAATGGTC TGGGAAGATC TCAAGCCCTC CGACATTCTC
ACCAGGCAAG CCTTCGAGAA TGCCATCGTG GTGAACTCAG CGATTGGCGG CTCCACCAAC
GCGCCGATCC ATCTCAACGC GCTGGCCCGC CATATCGGCG TGGAGCTCTC GATCGACGAC
TGGCAGAGCG TCGGCCACAA GATCCCGCTG CTGGTCAACA TGCAGCCGGC GGGCTTCTAT
CTCGGCGAGG AATTCCATCG CGCCGGCGGC GTGCCGGCCG TGGTGCGCGA ACTCATGAAG
CACGGCAAGA TCCACAAGGA CGCGCTGACG GTGAATGGCC GCGGCATCGG CGTGAACTGC
GCCAATGCGC CGTTGCCCGA CGGCGAGGTG ATCAAGACTT ACGACGGCCC GCTGGTGCAG
GACGCCGGCT TCCTGGTGTT GCGCGGCAAC CTGTTCGATT CGGCGATCAT GAAGACCAGC
GTGATCTCGC TGGAATTCCG CGAGCGCTAT CTGGCGACGC CGGGCGATCT CAACGCCTTC
GAGGGCCGCG CCATCGTGTT CGAAGGCCCG GAGGACTATC ATGCCCGGAT CGACGACGAA
GCGCTCGAGG TCGACGAGCA CTGCATCCTG TTCGTACGCG GCACCGGGCC GATCGGCTAT
CCGGGCGGCG CCGAGGTGGT CAACATGCAG CCGCCGGCGG CCTTGATCAA ACGCGGCATC
CACTCGCTGC CCTGCATCGG CGACGGACGG CAATCCGGCA CGTCCGGCTC GCCGTCGATC
CTCAACGCTA CGCCGGAAGC CGCCGCCGAT GGCGGCCTCG CCATCCTGCG CACCGGCGAC
AAGGTGCGCA TCGACCTCAA CCTCGGCAGC GCCAATATCC TGATCTCGGA TGAGGAGCTG
GCGCAACGCC GCGCCGAGCT GAAAGCCCAT GGCGGATTCA AATATCCGGC GCACCAGACG
CCGTGGCAGG AATTGTATCG CGCAACGGTC GGCCAACAGG CCACCGGCGC CTGCCTTGAG
CTTGCGACGC GCTATCACGA CATCGCAGGC AAAGTCGGCG TCGCGAGACA TAATCATTAG
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| Protein sequence | MDKPVTGRKL RSSEWFNDPH NPAMTALYLE RYLNYGLTRK ELQAGKPIIG IAQTGNDLSP
CNRHHLELAQ RVREGIREAG GIAMEFPMHP IQETGKRPTA ALDRNLAYLG LVEILFSYPL
DGVVLTTGCD KTTPACLMAA ATVNLPAIVL SGGPMLNGWH EGERTGSGTV IWKSRERMAA
GEIDYEEFMD IVASSAPSVG HCNTMGTAST MNALAEALGM SLPGCAAIPA PYRERGQIAY
QTGLRAVQMV WEDLKPSDIL TRQAFENAIV VNSAIGGSTN APIHLNALAR HIGVELSIDD
WQSVGHKIPL LVNMQPAGFY LGEEFHRAGG VPAVVRELMK HGKIHKDALT VNGRGIGVNC
ANAPLPDGEV IKTYDGPLVQ DAGFLVLRGN LFDSAIMKTS VISLEFRERY LATPGDLNAF
EGRAIVFEGP EDYHARIDDE ALEVDEHCIL FVRGTGPIGY PGGAEVVNMQ PPAALIKRGI
HSLPCIGDGR QSGTSGSPSI LNATPEAAAD GGLAILRTGD KVRIDLNLGS ANILISDEEL
AQRRAELKAH GGFKYPAHQT PWQELYRATV GQQATGACLE LATRYHDIAG KVGVARHNH
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