| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3646 |
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| Symbol | |
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| ID | 3972017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4055091 |
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| End bp | 4056416 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637926755 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_533500 |
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| Protein GI | 90425130 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.17089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.182494 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGGAT TTACCCCGGA TCGCCGAACC TTGCTGAAGG GCAGCGCGCT GACGCTGGCC
GCCGCGGCGA CGATGTCGGC CGAGCAATTG CTGGGCTATG CCAAGGCCTG GGCGCAGTCC
GCGCCGTGGA AGCCGGAAGC CGGCGCCAAG ATCAACCTGC TGCGCTGGAA GCGCTTCGTC
GAAGCCGAGG ACGTCGCCTT CATGAAGATC GTCGAGGCGT TCCAAAAGGC CACCGGCTGC
GCCGTCAGCG TCTCCAACGA ATCCTATGAC GACATTCAGC CCAAGGCCTC GGTGGCGGCG
AACACCGGGC AGGGACTCGA CATGGTGTGG GGGTTGTATT CGCTGCCGCA TTTGTTGGGT
AACAAGGTCA CCGACGTCGC CGACGTCGCG AATTATCTCG GTGGCAAATA CGGCGGCTGG
ACCAAGTCGG CCGAGGATTA CTGCAAAGTC GGCAACAAAT GGGTCGGCGT GCCGATCGCC
ACCACCGGCG CGCTGATCAA CTACCGCATC GCCGCCTGCG AAAAGGCCGG CTTCAAGGAA
TTTCCGAAGG ACACCGCGGG CTTCTTGGAA TTGTGCAAGG GGCTGCAGAA GAACGGCACC
CCGGCCGGCA TGGCGCTCGG CCACGCCTCG GGCGACGCCA ACACCTGGCT GTATTGGGCG
CTGTGGACGT TCGGCGGCAA TCTGGTCGAC GCCAACAACA AGGTGGTGAT CAACTCGCCG
GAAACCGCGG CCTCGCTGGA ATATATCAAG CAGCTCTACG GCACGTTCAT CCCCGGCACG
GTGTCGTGGA ACGATTCCTC CAACAACAAG GCGTTCCTCG GCGGGCAGTT GCACCTCACC
GTGAACGGCA TTTCGATCTA CGTCACCGCG AAACGCGAGG CGCCGGCGAT CGCCGAGGAC
ATGAACCACG CCTATATGCC GATCGGCCCC TACGGCAAGC CGAGCGAAAT GCATCTGGCG
TTCCCGATGC TGATCTTCAA TTTCACCAAG TATCCGCAGG CCTGCAAGGC GTTCACCGCC
TTCATGCTGG AAGCGCCGCA GTTCAATCCG TGGATCGAGG CGGCGCAGGG CTATCTGTCG
CACTTCCTCA ACGCCTACGA CGCCAACCCG ATCTGGACCG CCGACCCCAA GACCACACCG
TATCGCGACG TCGCCAAGCG CGCCCGCACG CCCGCCGGGC TCGGCACGCT CGGCGAGAAC
GCGGCGTCGG CGATCGCCGA CTTCATCCTG GTCGACATGT TTGCGAACTA TTGCACCGGC
CGCGAAGACG TGAAGGGCTC GATCGCCTCG GCGGAACGGC AATTGAAGCG GATCTATCGG
GCGTGA
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| Protein sequence | MTGFTPDRRT LLKGSALTLA AAATMSAEQL LGYAKAWAQS APWKPEAGAK INLLRWKRFV
EAEDVAFMKI VEAFQKATGC AVSVSNESYD DIQPKASVAA NTGQGLDMVW GLYSLPHLLG
NKVTDVADVA NYLGGKYGGW TKSAEDYCKV GNKWVGVPIA TTGALINYRI AACEKAGFKE
FPKDTAGFLE LCKGLQKNGT PAGMALGHAS GDANTWLYWA LWTFGGNLVD ANNKVVINSP
ETAASLEYIK QLYGTFIPGT VSWNDSSNNK AFLGGQLHLT VNGISIYVTA KREAPAIAED
MNHAYMPIGP YGKPSEMHLA FPMLIFNFTK YPQACKAFTA FMLEAPQFNP WIEAAQGYLS
HFLNAYDANP IWTADPKTTP YRDVAKRART PAGLGTLGEN AASAIADFIL VDMFANYCTG
REDVKGSIAS AERQLKRIYR A
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