| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3641 |
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| Symbol | |
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| ID | 3970657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4049334 |
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| End bp | 4050161 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637926750 |
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| Product | RNA methyltransferase TrmH, group 3 |
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| Protein accession | YP_533495 |
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| Protein GI | 90425125 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.179566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.181036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATT TCGAGCGAAA GCCGCGTTTC GGGCGCAAGC CCGACAAATC CAGCCGCAAT
CCCAAGGAGG CCGGCCGGCA GCCCTGGCGC GACCGCGAAT CCCGTCCCGA CGGACCGGCC
ATCCTGTATG GCTGGCATAC CGTGGTGGCG GCGCTCGGCA ATCCGCAGCG CACGATTCGC
AAGCTTCTGC TCAGCGAGAA CGCCGCGCGA AGGCTGGCGG ATGAAAACAT CGACACCCGG
GTGCCGCCGG AAATCGTCCG GCCGAGCCTG ATCGACCAGC GGCTCGGCCC CGACGCGGTG
CATCAGGGCC TGCTCGCCGA AGCCGACCCG CTGGAGCCGC CGGAACTCGA CACCCTGCCG
CAACAGGGCA TCGTGCTGGT GCTCGACCAG ATCACCGATC CGCACAATGT CGGGGCGATT
CTGCGCTCGG CCGCCGCCTT CGCCGTCAAG GCGATCGTCA CCACCGCCCG GCACAGCCCG
GAAGCCACCG GCGTGCTGGC GAAATCCGCT TCCGGCGCGC TCGAACTGGT GCCGATGGTC
ACGGTGCAGA ACCTCGCCCG CGCGCTGACC GACTTGAACG ACCGCGGTTT CCAGACCGTC
GGGCTCGACA GCGAAGGTGG CGACGACCTC GCGACGATTC CGCTCTCCGC GCCGCTGGCG
CTGGTGCTCG GCGCCGAGGG CAAGGGGCTG CGGCAACTGA CGCGGCAGAC CTGTAGCGCG
CTGGCGCGGC TCGACATGCC GGGCGAGATC AAGAGCCTCA ACGTCTCCAA CGCCGCAGCA
TTGGCGCTCT ATATCGGCGC GAGCCGGCTC GGGCTGATGA AGGGCTAG
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| Protein sequence | MTDFERKPRF GRKPDKSSRN PKEAGRQPWR DRESRPDGPA ILYGWHTVVA ALGNPQRTIR
KLLLSENAAR RLADENIDTR VPPEIVRPSL IDQRLGPDAV HQGLLAEADP LEPPELDTLP
QQGIVLVLDQ ITDPHNVGAI LRSAAAFAVK AIVTTARHSP EATGVLAKSA SGALELVPMV
TVQNLARALT DLNDRGFQTV GLDSEGGDDL ATIPLSAPLA LVLGAEGKGL RQLTRQTCSA
LARLDMPGEI KSLNVSNAAA LALYIGASRL GLMKG
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