Gene RPC_3623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3623 
Symbol 
ID3971651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4028845 
End bp4029354 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content60% 
IMG OID637926731 
Producthypothetical protein 
Protein accessionYP_533477 
Protein GI90425107 
COG category[S] Function unknown 
COG ID[COG3685] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0183446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTTCT TCAGCAAAGA CATTCAATCG ATGGACGACC TCCTGCTGCA CGGATTGCAG 
GACATCTATT ACGCCGAGCA GCAGATCACC AAGGCGCTGC CGACGATGAT CGAACAGGCG
ACCAATCGCG ACCTCGCGCA AGGGCTGAAA AGTCATCTCG AGGAAACCAA CAAGCAGATC
GAGCGGCTCG ACCAGGTGTT CAAGAAGCTC GGCCAGACCC CTTCGGGCAC CGACTGCCCG
GCAATCGACG GACTGATCAA GGAGTCCAAC GAAACCGCGG GCGAGATCGC CGACAAATCG
GTGCTCGACG CCGCGATCAT CGCCAACGCG CAGGCCGTCG AACACTACGA AATCGCCCGC
TACGGCACCC TGATCGCGTG GGCCGAAGAG CTCGGCCACG ACGACATCGT CCGATTCCTC
ACCACCAATC TGAACGAGGA AAAGGCCGCC AATACCAAGC TCAACACCGT GGCGCTCCGC
AAGGGCGTCA ATCGCAAAGC TGCAAGCTGA
 
Protein sequence
MGFFSKDIQS MDDLLLHGLQ DIYYAEQQIT KALPTMIEQA TNRDLAQGLK SHLEETNKQI 
ERLDQVFKKL GQTPSGTDCP AIDGLIKESN ETAGEIADKS VLDAAIIANA QAVEHYEIAR
YGTLIAWAEE LGHDDIVRFL TTNLNEEKAA NTKLNTVALR KGVNRKAAS