| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3598 |
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| Symbol | |
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| ID | 3971625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4000249 |
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| End bp | 4000917 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637926708 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_533455 |
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| Protein GI | 90425085 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.822043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCATC CGCCGAAATC GCCCCTTCCA GTTCGGAAGA GTCACGGTGG ACGCCCCTCC
CTCCAAGCAT CTGCCCGTCT CACCGAGCAC ATCGTCGACA AGGCCACCGC GCTTTTTCTT
CGCGCCGGCT TCGAGGCGGT CAGCATCGAC ACCATCGCAG CCGAAGCGGC GATTTCAAAG
CGGACGTTTT ATACCCGGTT CAGCGGCAAG CCAGATTTGT TCACGGCCGT GGTCGTTCGC
TTTGTCGAAA AACGCATGGC CAAGATGGAC GCCATTTCCG CCGTGGTGGG CCCGCTGCGG
CATCAACTCG AAGCGATCGC CTGTGAGATA CTTCGGATCG CTTGCGAACC GGACGCCATC
GCCCTCGACC GGATCGTCAC CGCCGAAGTT GAGCGATTTC CGGAACTTGG CCGCATTCTG
TATGATTTCG CGGTGCCACG CGCGGTCGGC ACGATAGAGA AAATTCTCAA TCAAGCCTGC
GCGGACGGCA CGCTCGACCG GATCGATACG CATCATGCAG CCGAGCATTT TCTCTACGCG
GTGATCGTCG GGCCGATGCG CATGGTGGCG CTCGGCGTAG AAGGCCGCCG CCTGTCAGGC
GGCCGGCTCA AGCGATTGCG ACAGTCGATC GATCTATTTC TCAACGGCGT TCGCTCGCGC
TCCGACTAG
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| Protein sequence | MSHPPKSPLP VRKSHGGRPS LQASARLTEH IVDKATALFL RAGFEAVSID TIAAEAAISK
RTFYTRFSGK PDLFTAVVVR FVEKRMAKMD AISAVVGPLR HQLEAIACEI LRIACEPDAI
ALDRIVTAEV ERFPELGRIL YDFAVPRAVG TIEKILNQAC ADGTLDRIDT HHAAEHFLYA
VIVGPMRMVA LGVEGRRLSG GRLKRLRQSI DLFLNGVRSR SD
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