| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3588 |
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| Symbol | |
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| ID | 3971615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3991900 |
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| End bp | 3992457 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637926698 |
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| Product | sigma-24 (FecI-like) |
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| Protein accession | YP_533445 |
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| Protein GI | 90425075 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGGGCGC GGGTGACGCC GAGTGACAAT CGCCTCACCG ACGCTGCGCC CGACGTCGCC
AGGATTCGGC ATCAGGTCGC GGACGTCGTG CGCCGCGATC GCGGCCGCCT GCTCCGCTTC
GTGCATGCGA AGCTGTCTGG CGCCTCCGAT CTGGATGCCG AGGATGTCGT TGCGGACACC
GTGCTGCGGT TGATCGAGCG GGCCGATCTG CTCACCGAGG TGGAGAATGT GACGGCCTAT
CTGTTCCGGG CGCTGGCGAA TGGCGTGATC GACCGGATTC GCCGCCGTCG CGAGCTGACA
CCGTTGCCCG AAGAGGTTGA AGATCCCGCG CTCGGGCCGG AACAGACGCT GGAACAGACG
CAGCTTCGAC GCCGGCTGCG CGCCGCGCTG GACCGGCTGC CGCCAGCGCA ACGGGCGGTT
TGGATCGCCG TCGAGATCGA GGGCGTGCCG TTCCGCGAAC TCGCCGCGCA ATGGAATGAA
CCGATCGGCA CGCTGCTGTC GCGCAAGAAC CGGGCAACCA AGTCGTTGCG GCAATGGCTG
GCGGAGGACG CGACGTGA
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| Protein sequence | MGARVTPSDN RLTDAAPDVA RIRHQVADVV RRDRGRLLRF VHAKLSGASD LDAEDVVADT
VLRLIERADL LTEVENVTAY LFRALANGVI DRIRRRRELT PLPEEVEDPA LGPEQTLEQT
QLRRRLRAAL DRLPPAQRAV WIAVEIEGVP FRELAAQWNE PIGTLLSRKN RATKSLRQWL
AEDAT
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