Gene RPC_3587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3587 
Symbol 
ID3972826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand+ 
Start bp3990763 
End bp3991389 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content63% 
IMG OID637926697 
ProductTetR family transcriptional regulator 
Protein accessionYP_533444 
Protein GI90425074 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.997688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGGA CGAAACTGGA AGCAGAAACA ACGCGCGAGA CCATACTCGC GGTGGCTGAG 
CGGCTGTTCC TCGAACGCGG CGTCACCGAG GTGTCGCTGG AGCAGATCGC CGTGGCGGCC 
GGGTTCACCC GGGGGGCGGT GCATTGGCAT TTCCAGAACA AGCAGGGGCT GCTGCTAGCG 
TTGCTGGACC GGATGGGCCT TCCGCTCGAA CAACTCGCCG GTCAGCTCGA GATCGACGAT 
ACCCTCGACC CGATGGACGA ACTGGTCCGC GACATGACCG GGCGGCTCTG CGAGCTGGAG 
ATGGATCCGA AACGCAAGCG GCTCTCCACC TACCTGGTCA ATTTCGCAGC GGTCGAAGCG 
CCGGAGCGCC AGCGCAACTT CGACCGCAAA TTCAGATCCT CGGTCACCAT CATTTTTCGT 
TTGGCCGAGA AACGCGGCCG GCTGGCGCCG CACTGGCGGC CGGAGATCGC CGCGCTAGCC 
TTCTGCGGCA TGGTGATGGG CCTGATCAAT CAATGGCTGA ACGGCGAGAC CGAGTTCGAC 
ATGCGCAATG ACGTCACCGC GGCTGTGCGG GCTTTTTCGT CCTCGCTGCG GGCGCAGCCC 
GACGATCCAA AAAGACCAGG AGCTTAG
 
Protein sequence
MRRTKLEAET TRETILAVAE RLFLERGVTE VSLEQIAVAA GFTRGAVHWH FQNKQGLLLA 
LLDRMGLPLE QLAGQLEIDD TLDPMDELVR DMTGRLCELE MDPKRKRLST YLVNFAAVEA 
PERQRNFDRK FRSSVTIIFR LAEKRGRLAP HWRPEIAALA FCGMVMGLIN QWLNGETEFD 
MRNDVTAAVR AFSSSLRAQP DDPKRPGA