Gene RPC_3584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3584 
Symbol 
ID3972823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3985471 
End bp3986307 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content63% 
IMG OID637926694 
Producthypothetical protein 
Protein accessionYP_533441 
Protein GI90425071 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCTTA AGAACATTGT GGTCTTCGTG GAGCCATCGA ACGCCGGTGC CACGCGGGCC 
CGCTACGCTG TCGAGTTGGC GCGGCGTCAT GGCGCGCATC TGATCGGCAT TTTCGTGGCG
TCCTCCGATG GGCCGATCCC GGCAAATGCC TATGTCCGCG GCCGCGACGC GATGCGTCGG
CTGATCGAAC TGCACGACGC CAACGCCATT GAGACCACCA GTGTCGCGAG CCGAAACTTC
AACACCGCGA CCAATAGCGC TGACATCACC TACGAGTTCA GGATCATCCG CGAGATCGAG
TCCGACGATA CCAAGTTGCA TTGCCTGCAC GCCGATCTGG TGATCGTCGG TCATCCTCGG
CCCGGCGGGC TGCCGCTCAA TTCGTCGGCC GAAGGCCTGT TGCTCGCCAC CGGCATTCCG
TTCCTGATCG TGCCCGACGG TTGGCCGTCG GGAGCCGTTG CGCAGCGGGT GCTGTTGGCA
TGGAACGCCA GCCGTGAGGC GAGGCGCGCG ATTGCGGATT CGTTGCCCCT GCTGTCGGCG
GCGCAGTCGG TTTCGATTGT CGTGATCGAT GCTGCCAAGA ATCGTCTGCA TGGCGAGAAT
CCCGGCGCCG ACGTTGCGGT CTATCTCAGC AGACATGGTG CGCATGTCAC GACCGAGCCA
ATCGATTCCA ACGGATCCCC GATCGCCGAC GTGATCTTGC AACACGCCGT GCATGGCGGC
TTCGATCTCA TTGTACTTGG TGCCTACAGT CATGCCCGGG TTCGCGAGGC GGTGTTCGGC
GGCGTGACGC GATCGCTACT CAAGTTGGCG ACCATTCCGA TGCTGATCGC CCACTGA
 
Protein sequence
MGLKNIVVFV EPSNAGATRA RYAVELARRH GAHLIGIFVA SSDGPIPANA YVRGRDAMRR 
LIELHDANAI ETTSVASRNF NTATNSADIT YEFRIIREIE SDDTKLHCLH ADLVIVGHPR
PGGLPLNSSA EGLLLATGIP FLIVPDGWPS GAVAQRVLLA WNASREARRA IADSLPLLSA
AQSVSIVVID AAKNRLHGEN PGADVAVYLS RHGAHVTTEP IDSNGSPIAD VILQHAVHGG
FDLIVLGAYS HARVREAVFG GVTRSLLKLA TIPMLIAH