| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3580 |
|---|
| Symbol | |
|---|
| ID | 3972819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 3982765 |
|---|
| End bp | 3983406 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637926690 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_533437 |
|---|
| Protein GI | 90425067 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4803] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGT TTGCCGTTAT CATTTTCGGG GACCAAGCGA AGGCCAATGA AGCGTTGCGC
GTTCTCACCG AGCTGCAAGC CGACAACAGC TTGGTGCTGT TCAGCCAAGC TGTCATTGCC
AAGGATCTTG CTGGAACTGT CTCCCTGATG GCCCCTGTAT CGGGCGGCGC CGTTGGATCT
GCGGTCAGCG GTTTGGCGAG CCGTTTGATT GCGGTCCCGG TGGGCGGCCA TGGCGGTCTG
TCGGATGCGG GCGTCTTGGA CAGTTTTTGC CAAGAGGCCG CCGACGCGCT CAAGCCCGGC
GCGACCGCCA TCGTGGCTGA GATTTCTGAA GATCGGTTGG GCCCTCTTAA CACTCAGATG
CACGCGCTCG GCGGCCAAGT GCTGCGGAGC TGCAACGGCT ACTCCGAGGG CGACGAGATT
GCCAAGCTGA CCGGTCGCCA GATCGCGAAC ATCGAGCGGC TCAACGCCGA ATACGTCCGG
GCGCCGCAAG ACGCCGACAA GCCAAGCGAA ACGCCTGTCG ATGCTGTAAC GCTTACTCCC
GACGAGCGTG CAAGCAATCA GAGTATCGTC AAAGCCAACG CCGAGGCACG CTCCGCCAAG
CTCAGTCAGG CCTGCGGTCT GACGAAAGAC GCTCTGAGTT GA
|
|---|
| Protein sequence | MSKFAVIIFG DQAKANEALR VLTELQADNS LVLFSQAVIA KDLAGTVSLM APVSGGAVGS
AVSGLASRLI AVPVGGHGGL SDAGVLDSFC QEAADALKPG ATAIVAEISE DRLGPLNTQM
HALGGQVLRS CNGYSEGDEI AKLTGRQIAN IERLNAEYVR APQDADKPSE TPVDAVTLTP
DERASNQSIV KANAEARSAK LSQACGLTKD ALS
|
|---|
| |