| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3566 |
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| Symbol | |
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| ID | 3973766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3962070 |
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| End bp | 3966437 |
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| Gene Length | 4368 bp |
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| Protein Length | 1455 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926677 |
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| Product | methylase/helicase |
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| Protein accession | YP_533424 |
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| Protein GI | 90425054 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCAT CTTCTTCCTC CACGGCCATG CGATTATCAG CGTCGCTGGC CAGCGGCGAT
GCCGCCGCGC GCATCGTGGC CGCAGCGGGA TTGATCGTTG CGCAACTGGA GCGCGGCCGC
CGCATTGATG CGGCTGGCCT CCGCGCCGCG ATGGAAACAG CCTTTGCCGG TTCGGACGCT
GATGGCGCCT GGGATTGGAA GAGCGCCTAT GATGCCTGTG AGGCCGCGAC CGTCCTGTTC
CTGCGCAAAT TCGGCCCGGC GATGCGCGCA CGTGCCGCGT CGTCCGACGC CATGCTTCCG
ATGCTGGCGA AGATTGCGCG CCTTCTTCCA ACCCATACGC GACGATCCGA AGAAAGCCAG
GCGCTGCAGC AATTCAGCTC GCCGATCGGG CTCGGACTGG CAGCTTCCAC CGCTGCGGCA
ATCACCCCCT CCGACGTCGT ACTCGAGCCG TCGGCCGGGA CCGGGCTGCT CGCCATTCTC
GCCGAATTGT CCGGCGCGAC ACTCGCTCTG AACGAACTGG CCGAGACCCG TGCTGGCTTG
CTCGAGCTGT TGTTCCGCGA CGTCTCCGTC ACCCGCTTCG ACGCCGCGCA GATCGACGAT
CATCTCGGCA TTGGCATCAC GCCCAGCGTC GTGCTGATGA ACCCGCCATT TTCCGCACTC
GCCAATGTCG ATCGCCGGAT GGGCGACGCT GCGTTGCGCC ATATCTCGTC GGCACTGGCG
CGGCTGGCCG ATGGCGGGCG CCTCGTCACC ATCACCGGCG CCAGTTGTGC ACCCGATAAC
CCGTCGTGGC GCGACGCCTT TGTCGACCTG CAGCAGCGCG GGCAGGTGGT GTTCTCCGCG
GCGGTCGATG GTGCGGTCTA CGCCCGACAC GGCACCACGA TGGAGACCCG CCTGACCGTG
ATCGACAAGC GGGGGGCGGA CGACCCCAGG GTATTTCCGG CATCACTAGG CGTGGCGCCC
GACGTTGTCA CGCTACTCCG CTGGATAAAA GAATCTGTGC CACCTCGGTT GCCGGTCTCG
CTCCCGCTGG CAGTCCATTC GATCGGCCGA CCGATGCCAA GCGTCGGCCG CGCACAGCAG
CCCGTCGTCA AAAGGCCTTC CTCCTTCCCG GCTAAGCTAC CCCAGCCAGA CGCGATTGAG
CTCGCCTATC AGACGGTCGA CTGGAAGCCG ATCGAGGGCG GCGGCATCAC CGATGCGCTC
TATGAAGCCT GCAGCTTGCA GTCGATCCGG ATTCCCGGCG CCAAGGCGCA TCCCACCAAG
CTGGTGCAGT CGGCGGCAAT GGCCTCTGTG GCGCCACCGA AGCCGAGCTA TCACCCGCAT
CTGCCTGCAG AGGTCGTCGA ACGCGGTCTG TTGTCGGATG CTCAGCTGGA AACCGTAATC
TATGCCGGGG AAGCCCATTC TCAGTTCCTG GCTGGGTCTT GGAGCGTTGA CCCGACGCTC
GACATCGTCG CCGCCGCGCG TGATCACGCC GAGACCTCGG TTCGATTTCG CTCAGGCTTC
ATGCTCGGCG ACGGCACCGG TGCCGGCAAG GGCCGCCAGG TCGCCGGCAT CCTGCTCGAC
AATTGGTTGA AGGGACGGCG CAAGGCGGTC TGGATTTCCA AGTCCGACAA GCTGATCGAG
GATGCCCAGC GCGACTGGTC GGCGCTCGGA CAGGAACGGT TGCTGGTGAC ACCGCTGTCG
CATTTCCGGC AAGGCACCCC GATCCGTCTC GAGCAAGGCA TCCTTTTCAC CACCTATGCC
ACGCTGCGCT CCGACGCCCG CGACGACAAG ATATCACGCG TCCGGCAGAT CGTGGAATGG
TTGGGCGACA ATTCTGGCTC TGAGACCGAG GCGGGTTTCG ACGGCGTAAT CATCTTCGAC
GAGTCCCACG CGATGCAGAA TGCTGCAGGC GGCAAAGGCG AACGCGGCGA CCAGGCTGCC
TCGCAGCAGG GTCGCGCCGG TCTTCGCCTG CAACACGCGC TTCCCAACGC GCGCATCGTC
TATGTCTCGG CGACCGGCGC CACCACGGTT CATAACCTCG CCTATGCGCA GCGCCTCGGC
CTTTGGGGCG GCGACGATTT TCCCTTCGCC ACCCGCGCGG AATTTGTCGA GGCAATCGAG
GGCGGCGGCG TGGCGGCGAT GGAGGTGCTG GCCCGCGATC TCAAGGCGCT CGGGCTCTAT
ACGGCGCGGT CGCTTTCTTA CGAGGGGGTG GAGTACCAAC TGGTCGAGCA CCGGCTCACC
GAGGAACAGA TCCGGATCTA TGACGGCTAT GCTGGTGCGT TCTCGATCAT CCACAACAAC
CTCGATGCCG CGCTGCGCGC CGCCAACGTC ACCGGGACCA CCGGCGCGCT GAACGCGCAG
GCCAAGTCCG CGGCGAGATC CGCATTCGAA TCTGCCAAGC AGCGGTTCTT CAACCACCTC
ATCACCGCGA TGAAGGTGCC GTCGCTGATC GCCTCGGTCG AGCGCGATCT GAACGATGGC
CATGCCGCCG TCATCCAGAT TGTCTCCACC GGCGAGGCGC TGATGGAGCG CCGGCTTGCC
GAGATCCCGA CCGAGGAATG GGGTGACGTC CAGATCGACA TCACGCCGCG GGAATATGTG
CTGGATTATC TCAGCCATTC GTTCCCGACC CAGCTCTACG AGCCGTTCAC CGACAGCGAA
GGCAATTTGT CGTCGCGGCC AGTGTTCCGG GATGGCCAAC CGGTGCAATG CCGGGACGCC
GTCGTGCGGC GCGACCGGTT GATCGAGCAT CTCGCCTCAT TGCCGGCGGT ACACGGCGCG
CTCGATCAGA TCGTGCAGCG CTTTGGCTCC GACATGGTCG CGGAAGTGAC CGGACGCTCC
CGGCGCATCA TCCGCAAGAC CGGCCCGAAT GTCGTTGATT GCCTCAAAGT GGAGAACCGC
GCCGGCTCCG CCAATCTCGG CGAGGCTCAG GCGTTCATGG ACGACCTCAA GCGCATTCTG
GTGTTCTCGG AAGCCGGCGG CACCGGGCGC TCCTATCACG CAGAGCTCTC AGCCAAGAAC
CGGCGGCTGC GCGTGCACTA TCTGCTGGAA GCTGGATGGA AGGCCGATGC TGCGATCCAG
GGGCTTGGCC GCACCAACCG CACCAATCAG GCGCAGCCTC CATTGTTTCG GCCGATCGCG
ACCGATGTGA AGGCCGAGAA GCGTTTTCTT TCGACCATCG CGCGCCGGCT CGACACGCTC
GGTGCCATCA CCAAAGGCCA GCGCCAGACC GGCGGGCAGG GCCTGTTCCG CGCCGAGGAC
AACCTTGAAA GCCACTATGC CCGCGACGCC CTGCGGCAAC TCTATCTGCG GCTGGTCAAC
GGCAAGATCG TCGATTGTTC GCTGCAAGCG TTCGAGGACG CCACCGGGCT GAAGCTGACC
GATAGCAAAG GCATCAAGGA CGAGCTGCCG CCGATCACCA CTTTCCTCAA CCGGCTGCTG
GCGCTGACGA TCGATCTGCA GAACATTCTG TTTGCGGCCT TCGAGCAACT GCTGACCGCG
CGCGTCGAGG GCGCGATCGC GTCCGGCACC TTTGATGCCG GCCTGGAAAC CCTGACCGCC
GAAAGCTTCA CGGTCACTGA CCGGCAGACG ATCTACACCC ATCCCGGCAC CTTAGCCGAG
ACCCGTTTGC TCACGATCAC CCAGCGCGAC CGCAACCGAC CGGTCACGCT CGACGAGGCG
CTACAGCGTC TCGCCGATCC ACGTGCGCAA TGTCTGGTCA ACGCCCAGTC CGGTCGCGCC
GCCGTGCAGG TTCCGGCGCG TAGCATCATG CTGGATGACG GCGAGGTGGA ACGAAGAGTT
CGTCTGATCC GGCCGATGGA GCATCCGACG TTGCCTCTCG CGTTGATGCC GCAGACCCAT
TGGCAAGAGA CCGACCGCGA GACCTTTGCG CACGCCTGGG AAGCTGAACT GGCTGAGGTG
CCGGAGTTCA CCTCAACCGA AATCCACATC GTGACCGGTT TACTGCTGCC GATCTGGAAG
CGGTTGCCGA ATGAATCGAC GCGGGTCTAC CGGCTGCAGA CCGACGTCGG GGAGCGCATC
GTCGGCCGCA AGGTGTCGGC GGCTTGGGCG GCTACCGCGA CCGAGACGGG CATCTCGACC
ATCACCCCCG ACGCTGCGTT CGCGGCGTTG CTCGATGGCA AGACGATCAT TGATCTTGCG
GAATCCCTGC AGCTGCGCCG GGCTCGCGTA ATGGGCGTGA ACCGGATCGA ATTGGCCGGC
TTCACCGAGG CGATGCGCGA CCGTCTTCGC GCCTATGGAC TGTTCAGCGA GATCGTCTCC
TGGAAGCTGC GCTTCTTCGT GCCGCTGGAT GCGACCGGCA CGGCGGTGCT GGCCAAAGTG
CTGGAGCACT ATCCGGTGCT GCGGATCTCC GATCGGGCTG CGGCGTGA
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| Protein sequence | MIPSSSSTAM RLSASLASGD AAARIVAAAG LIVAQLERGR RIDAAGLRAA METAFAGSDA
DGAWDWKSAY DACEAATVLF LRKFGPAMRA RAASSDAMLP MLAKIARLLP THTRRSEESQ
ALQQFSSPIG LGLAASTAAA ITPSDVVLEP SAGTGLLAIL AELSGATLAL NELAETRAGL
LELLFRDVSV TRFDAAQIDD HLGIGITPSV VLMNPPFSAL ANVDRRMGDA ALRHISSALA
RLADGGRLVT ITGASCAPDN PSWRDAFVDL QQRGQVVFSA AVDGAVYARH GTTMETRLTV
IDKRGADDPR VFPASLGVAP DVVTLLRWIK ESVPPRLPVS LPLAVHSIGR PMPSVGRAQQ
PVVKRPSSFP AKLPQPDAIE LAYQTVDWKP IEGGGITDAL YEACSLQSIR IPGAKAHPTK
LVQSAAMASV APPKPSYHPH LPAEVVERGL LSDAQLETVI YAGEAHSQFL AGSWSVDPTL
DIVAAARDHA ETSVRFRSGF MLGDGTGAGK GRQVAGILLD NWLKGRRKAV WISKSDKLIE
DAQRDWSALG QERLLVTPLS HFRQGTPIRL EQGILFTTYA TLRSDARDDK ISRVRQIVEW
LGDNSGSETE AGFDGVIIFD ESHAMQNAAG GKGERGDQAA SQQGRAGLRL QHALPNARIV
YVSATGATTV HNLAYAQRLG LWGGDDFPFA TRAEFVEAIE GGGVAAMEVL ARDLKALGLY
TARSLSYEGV EYQLVEHRLT EEQIRIYDGY AGAFSIIHNN LDAALRAANV TGTTGALNAQ
AKSAARSAFE SAKQRFFNHL ITAMKVPSLI ASVERDLNDG HAAVIQIVST GEALMERRLA
EIPTEEWGDV QIDITPREYV LDYLSHSFPT QLYEPFTDSE GNLSSRPVFR DGQPVQCRDA
VVRRDRLIEH LASLPAVHGA LDQIVQRFGS DMVAEVTGRS RRIIRKTGPN VVDCLKVENR
AGSANLGEAQ AFMDDLKRIL VFSEAGGTGR SYHAELSAKN RRLRVHYLLE AGWKADAAIQ
GLGRTNRTNQ AQPPLFRPIA TDVKAEKRFL STIARRLDTL GAITKGQRQT GGQGLFRAED
NLESHYARDA LRQLYLRLVN GKIVDCSLQA FEDATGLKLT DSKGIKDELP PITTFLNRLL
ALTIDLQNIL FAAFEQLLTA RVEGAIASGT FDAGLETLTA ESFTVTDRQT IYTHPGTLAE
TRLLTITQRD RNRPVTLDEA LQRLADPRAQ CLVNAQSGRA AVQVPARSIM LDDGEVERRV
RLIRPMEHPT LPLALMPQTH WQETDRETFA HAWEAELAEV PEFTSTEIHI VTGLLLPIWK
RLPNESTRVY RLQTDVGERI VGRKVSAAWA ATATETGIST ITPDAAFAAL LDGKTIIDLA
ESLQLRRARV MGVNRIELAG FTEAMRDRLR AYGLFSEIVS WKLRFFVPLD ATGTAVLAKV
LEHYPVLRIS DRAAA
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