| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3529 |
|---|
| Symbol | |
|---|
| ID | 3973897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 3923391 |
|---|
| End bp | 3924608 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637926640 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_533387 |
|---|
| Protein GI | 90425017 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.170223 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCCG AACCGAGGCC CTCGTCCGGG GCCGCCTATG ATGAAATCCG TCAGGATGAG
CTTCCGTATC GCCGCCGCCA ACAGGCCATT CTTCGGGAGT TTGGAACCGT CGCGTTACAG
ACCCGTGACT TCCGACACAT CCTTCAGCAA GCGACCGAAC TAAGCGCCCG TGGCCTAGGG
TGTTCGTATG CGAAGGTCCT GGAATATCTT CCGAATGAGC AGCGCTTGAT CGTGCGTGCA
GGCATCGGCT GGCCGGCGGG TACAGTGGAC CACGTATCGC TCGGCGCGGA TATTGAGTCT
CCAGCCGGCT TTGCCTTTCA GACCGGCCAA TCGGTCATAT CCAATCATTT GCAGGCAGAA
ACGCGCTTCC GAACACCCGC ACTTTTGGCC GAACAAGGCA TTAAACGCGC GATCAACGTC
ATCATCCGAC GAGGTGGTGA GGGTAATACA CCGTTCGGTG TCCTCGAAGC TGATAGTCCG
GATTCTGGCC AATTCGACGA CGCGGACGCG GATTTCTTGG CGGGTTTTGC CGGCCTGCTC
GGCATTGCGA TTGAGCGTCA GCATGCAGAC GCCGAGCTGC AGGACGCCCT CGACAAACTA
CAGCAAGCGC TCGATCACGA GGCACTATTG ACGCGTGAGA TGAGTCACCG CGTTAAGAAC
AGTTTGACCT CGGTCGTCGG ACTTCTGCGA GTCCAGGCAC GCGGCTCAGA TTCCGTCGAT
GTGAAGAACG CGTTGGAAAA CGCTGCGATG CGTGTTGCGT CTATCGCGGA GGTTCACGAC
CATCTGTGGC GAGGTAGCAA GGTTGGATTT GTCGACCTCT CCGATTTTGT GGGACACCTA
TGCAAGAATC TCCAGAATTC TGCACCGGAA CACTCGATAC AATGTTATTC GGACTCAATT
ATCATCTCAG CCGACAAGGC AATTCCGTTA GGGCTGCTCG TCAACGAATT GGTGACGAAC
GCCGTCAAAT ACGCTTACGT CGATGGACCT GGTGTGATCA GGGTCGATGC GCGAGAAATT
AACGGGCATC TGATTATTGA GATTTCCGAC GAAGGCCTGG GCCTGCCTGA TGGATTTGAT
ATCAATCATC CACGGAAGAC GCTTGGCTTC CGAGTTATCA ATGGCTTGGT CCGCCAATTG
GTTGGCGAAC TAAACATTTC AAAAAACATA CCAAGGGGAT CGCTATTCAC GATAAAATTC
TCGCTCGATC CCCACTAG
|
|---|
| Protein sequence | MPSEPRPSSG AAYDEIRQDE LPYRRRQQAI LREFGTVALQ TRDFRHILQQ ATELSARGLG
CSYAKVLEYL PNEQRLIVRA GIGWPAGTVD HVSLGADIES PAGFAFQTGQ SVISNHLQAE
TRFRTPALLA EQGIKRAINV IIRRGGEGNT PFGVLEADSP DSGQFDDADA DFLAGFAGLL
GIAIERQHAD AELQDALDKL QQALDHEALL TREMSHRVKN SLTSVVGLLR VQARGSDSVD
VKNALENAAM RVASIAEVHD HLWRGSKVGF VDLSDFVGHL CKNLQNSAPE HSIQCYSDSI
IISADKAIPL GLLVNELVTN AVKYAYVDGP GVIRVDAREI NGHLIIEISD EGLGLPDGFD
INHPRKTLGF RVINGLVRQL VGELNISKNI PRGSLFTIKF SLDPH
|
|---|
| |