Gene RPC_3522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3522 
Symbol 
ID3973890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3915605 
End bp3915994 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content59% 
IMG OID637926633 
Producthypothetical protein 
Protein accessionYP_533380 
Protein GI90425010 
COG category[S] Function unknown 
COG ID[COG5639] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.133589 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGTTCG GTCATGGCAG CCTAACCCCC GGCAGCGGCT CTACTCACCG AGGCGGACAA 
TCTGTGCAGA CAACCGGGAC CAGTTCGGCG ATCACCGATG ACAGACCGGA GAAGTCCACA
TTTGAACTAC CAGCAAGCAT TCACCGTGAT CTCGTGGCCT GTGCCGAGGT TCTATCAAAG
GAGAAGACGG GGCAATCGAT CGCCGACCCC GCCAAGCGCG TGCGGCCGAT GCTGGAGAGA
TTCATGGCGG CCGATCGGGC CTTCGGGATC GCGCGCCGGA CAATGCAATC GTCAAGCGAA
ACGCCTGGCG GAATCGAGGG GAAGGCAAGA TTCGATCGAA GGTCGGCGAT CGATCTACAA
GTTTTTTTGT TGATCGTGCG TCGTCGATGA
 
Protein sequence
MQFGHGSLTP GSGSTHRGGQ SVQTTGTSSA ITDDRPEKST FELPASIHRD LVACAEVLSK 
EKTGQSIADP AKRVRPMLER FMAADRAFGI ARRTMQSSSE TPGGIEGKAR FDRRSAIDLQ
VFLLIVRRR