| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3517 |
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| Symbol | |
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| ID | 3973883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3907585 |
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| End bp | 3909606 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637926629 |
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| Product | anaerobic ribonucleoside triphosphate reductase |
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| Protein accession | YP_533376 |
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| Protein GI | 90425006 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.101344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATCC ATGCCGTTGC CACTCCGCCC CGACGCGTCA TCAAGCGCAG CGGTGAACAG
GCGCCGTTCG ATCCCGCCAA GATCCACTCG GCGATCGAGC GGGCCGGCAA GGCAACAGCG
GAATTCGACC GGCCCGAAGC CGATCTGCTC GGCATCCAAG CGATCAAGGT GATCAGCCAC
CGATTTATCG ACCAGGCGCC GCACATCGAG CAAATCCAGG ATGTGGTGGA GCAGGTGCTG
ATATCGGCCA ATCATTTTGC CACGGCGCGC GCCTACATCG TCTACCGCGA ACAGCGCGCC
CGGCTGCGCC GCGATCGCCA TACCGTGGTC GATGTCGAAA CCTCGATCAA CGAGTATCTC
GACCGCGCCG ACTGGCGGGT CAGCGCCAAC GCCAATCAGG GCTATTCGTT GGGCGGTTTG
ATCCTCAACA TCTCCGGCAA GATGGTCGCC AATTACTGGC TGTCGCACGT CTATCCGGCG
GAAGTCGGCC GCGCCCATCG CGATGGCGAC ATTCATATCC ACGATCTCGA CATGCTGGCC
GGCTATTGCG CCGGCTGGTC GCTGAGGATG CTGCTTGCCG AAGGCCTCAA CGGCGTACCC
GGCAAGGTCG AGGCCGGACC GCCGAAACAT CTGTCCAGCG CGGTGGGCCA GATCGTCAAT
TTCCTCGGCA CCTTGCAGAA CGAATGGGCC GGCGCGCAGG CCTTCAGCTC GTTCGATACT
TATATGGCGC CGTTTATCCG CAAGGATCGG CTCGATTATG CCGAGGTGCT GCAGTCGATT
CAGGAACTGG TCTACAACCT CAACGTTCCC TCGCGTTGGG GCACCCAGAC GCCGTTCACC
AATCTGACCT TCGACTGGAC CTGTCCGGAA GATTTGCGTG ACCAGACCCC GGTGATCGGC
GGCGAGGACA TGCCGTTCGT CTACGGCGAT CTGCAGCCGG AAATGGACAT GATCAACCGC
GCCTATATGG AGGTGATGAC CAAAGGCGAC GCCAAGGGTC GCGTCTTTAC GTTTCCGATT
CCGACCTACA ACATCACCCC GGAGTTTTCC TGGGACACCG ACAACGCCGA ACGGTTGTTC
GAGATGACCG CGAAATACGG CCTGCCGTAT TTCCAGAATT TTCTCAATTC CGATCTGAAG
CCGAACATGG TGCGCTCGAT GTGCTGCCGC CTGCAGCTCG ATCTTGGCGA ACTGCTGAAG
CGCGGCAACG GATTGTTCGG CAGCGCCGAG CAGACCGGCT CGACCGGCGT GGTGACGGTG
AATTGTGCGA GGCTGGGCTA TCTGCACAAA TCCGACGAGG CGGCGCTGTT CGCAAGGCTC
GATGAATTGC TGCAGATCGC CCGCACCAGC CTGGAGATCA AGCGCAAGGT GATCCAGCGC
CACATGGATG AAGGGCTGTT TCCCTATACC AAGCGCTATC TCGGCACCTT GCGCAATCAT
TTCGTCACCC TCGGCGTCAA CGGCGTCAAC GAAATGATCC GCAATTTCAC CGACGATCGT
GAAGACATCT CGACCGACTG GGGGCATGGC TTTGCGGTGA GATTCTTGGA TCACGTCCGC
GCCCGCATCG TCGGCTTTCA GGAAGAAACC GGCCACCTCT ACAATCTCGA GGCCACGCCG
GCGGAGGGCA CCACCTACCG GTTCGCGCGG GAAGACCAGA AGCGCTTCCC GGATATTCTG
CAGGCCGGCA CGCCGGATCA GCCCTACTAC ACCAATTCCA GCCAGCTTCC CGCCGGCTTC
ACCGATGATC CGTTCGAGGC GCTGGAACGG CAGGACGAAC TGCAGTGCAA ATACACCGGC
GGCACCGTGC TGCATCTCTA CATGGGCGAG CGGATTTCCT CGGCGGACGC CTGCAAGAAG
CTGGTTCGCC GCGCGCTGGA AAACTTCCGG CTGCCTTACG TCACGATCAC GCCGACCTTC
TCGATCTGCC CCAAACACGG CTACATCGCC GGCGAACACG TGTTCTGTCC GAAATGCGAC
GCCGAACTGT TGGCGCGCAA GCAGCTTGAA ACCGCTCATT AG
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| Protein sequence | MSIHAVATPP RRVIKRSGEQ APFDPAKIHS AIERAGKATA EFDRPEADLL GIQAIKVISH
RFIDQAPHIE QIQDVVEQVL ISANHFATAR AYIVYREQRA RLRRDRHTVV DVETSINEYL
DRADWRVSAN ANQGYSLGGL ILNISGKMVA NYWLSHVYPA EVGRAHRDGD IHIHDLDMLA
GYCAGWSLRM LLAEGLNGVP GKVEAGPPKH LSSAVGQIVN FLGTLQNEWA GAQAFSSFDT
YMAPFIRKDR LDYAEVLQSI QELVYNLNVP SRWGTQTPFT NLTFDWTCPE DLRDQTPVIG
GEDMPFVYGD LQPEMDMINR AYMEVMTKGD AKGRVFTFPI PTYNITPEFS WDTDNAERLF
EMTAKYGLPY FQNFLNSDLK PNMVRSMCCR LQLDLGELLK RGNGLFGSAE QTGSTGVVTV
NCARLGYLHK SDEAALFARL DELLQIARTS LEIKRKVIQR HMDEGLFPYT KRYLGTLRNH
FVTLGVNGVN EMIRNFTDDR EDISTDWGHG FAVRFLDHVR ARIVGFQEET GHLYNLEATP
AEGTTYRFAR EDQKRFPDIL QAGTPDQPYY TNSSQLPAGF TDDPFEALER QDELQCKYTG
GTVLHLYMGE RISSADACKK LVRRALENFR LPYVTITPTF SICPKHGYIA GEHVFCPKCD
AELLARKQLE TAH
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