| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3514 |
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| Symbol | |
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| ID | 3973880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3905310 |
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| End bp | 3906725 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637926626 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_533373 |
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| Protein GI | 90425003 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3800] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.15562 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA CCTTTCTCGG AGTCCGGTTG AAACGGCTGC GTGAGGAGCA TCGCCTGACC
CAGGCCGCGC TCGCCGCCAA GCTTGGTATT TCGCTGAGTT ACCTCAACCA GTTGGAGAAT
AATCAGCGAC CGCTCACGCT TCCGGTGGCG CTGGCGTTGA ACAAGACGTT CGGACTCGAC
ATCCAGTCTT TTTCAGAGGA CGACGAAGCG CGTTTGATTG CCGATTTGCG CGAGGCGGTT
GCCGATCCCG CCTTGGGCGA AACCATCGCC ACCTCCGATC TGCGCGAACT GGCACTCAAT
ATGCCGGCGA TCGGTCGGAC GCTGGTTGCG CTGTCGCAGA GATATCGCCA AGCCATCGAG
CAGTCCGCGG CGCTCTCCGC CCGGCTCGGG GAGGATCGCC AGGCCGCTTC GGCGATTCTG
CCTTCGACCC CGTTCGAGGA GGTCCGCGAT TTCTTCTATG CCCAGCATAA CTACATTCCC
GAACTCGACG AAGCCGCCGA GGCAATCGCC TTGCGAATGA ACCTGCCGCC CGGACGGATG
GCGCCCGCTC TGTCGTCTTT TCTCGAAGAT CGCGGCATGA CGATATTGAT CGGCGGCTCC
ACCGAATCCG GTCTGCAGCG GGAGTTTGAT CGGCAAACCC GCACCGTGCG GCTGTCGTCG
AGCCTTCACC CCGGACAGCA AGCTTTCCAA TTGGCAACCC ACATCGCTTT TCTCGATTTC
GACGACGCCA TCCGTTCAAT CGTCAGCAAC GCAGCATTCA CCAGCGACGA ATCGCGTGGC
CTCGCGCGGA TCGGGCTCGC GCATTATTTC GCGGGCGCGC TGGTGTTGCC CTACTCGGCG
TTCCTCCAAG AGGCGCAGCG CCGCCGTTAC GATATCGAAT TGCTCGGCCA CACTTTCGGC
GTCGGATTTG AAACCGCGTG CCATCGCTTG AGTACCTTGC AGCGCCACAA TGCCCGGGGC
GTCCCGTTCT TCTTCATTCG CGTCGATCGG GCCGGCAATA TTTCGAAACG TCAATCCGCG
ACCGACTTTC ATTTTTCGCG GGTCGGCGGC ACCTGTCCGC TGTGGAACGT CTATGAAGCC
TTCGCCTGTC CTGGACGAAT CCTCACCCAG TTGGCGCGAA TGCCGGACGG GCGAACCTAC
CTTTGGATCG CCCGCACGGT GTCGCATAGC CAGGGCGGCT ATCGGGCGCC CGGGAAAACC
TTCGCGGTGG CACTCGGCTG CGACGTCCGC CATGCCGGTA GCGTCGTCTA TTCGGAGGGA
CTCGACATCG ATCCGGCAAT CGCGACGCCG ATCGGCATGG GCTGCAAGGT CTGCGAACGG
CCGAATTGTC CCCAGCGGGC CTTCCCGCCG ATTGGTCATG CGCTCAACGT CGATGAGACG
CGCGCGCATT TTGCCCCCTA CGCGACCTCG TCTTGA
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| Protein sequence | MKKTFLGVRL KRLREEHRLT QAALAAKLGI SLSYLNQLEN NQRPLTLPVA LALNKTFGLD
IQSFSEDDEA RLIADLREAV ADPALGETIA TSDLRELALN MPAIGRTLVA LSQRYRQAIE
QSAALSARLG EDRQAASAIL PSTPFEEVRD FFYAQHNYIP ELDEAAEAIA LRMNLPPGRM
APALSSFLED RGMTILIGGS TESGLQREFD RQTRTVRLSS SLHPGQQAFQ LATHIAFLDF
DDAIRSIVSN AAFTSDESRG LARIGLAHYF AGALVLPYSA FLQEAQRRRY DIELLGHTFG
VGFETACHRL STLQRHNARG VPFFFIRVDR AGNISKRQSA TDFHFSRVGG TCPLWNVYEA
FACPGRILTQ LARMPDGRTY LWIARTVSHS QGGYRAPGKT FAVALGCDVR HAGSVVYSEG
LDIDPAIATP IGMGCKVCER PNCPQRAFPP IGHALNVDET RAHFAPYATS S
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