Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3509 |
Symbol | |
ID | 3973203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3900436 |
End bp | 3901056 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637926621 |
Product | hypothetical protein |
Protein accession | YP_533368 |
Protein GI | 90424998 |
COG category | [S] Function unknown |
COG ID | [COG1636] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.207175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0239615 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATGA ACGAGGTGAG GAGGCCGGCG CTATCGCTGC CGGCGGGCCA TGCCAAGGTG CTGCTGCATT CGTGCTGCGC GCCGTGTTCG GGCGAAGTAA TGGAAGCGAT GCTGGCCGCT GGCATCGACT ACACCGTGTT CTTTTACAAT CCGAACATCC ATCCCGAGCG CGAATACCTT CTGCGCAAGG ATGAAAATGC ACGATTTGCC GCCCGGCATG GCGTCGCGTT CGTGGACGCG GATTACGACG ATGCTCTCTG GCTGGCACGA ACCAAAGGAC TGGAATGCGA GCCGGAACGT GGCGAGCGTT GCAGCATTTG CTTCGACATG AGGCTCGAGC GAACCGCGCT CTATGCGTAT GAGCACGGCT TTTCAGTCAT CACCAGTTCG CTCGGCATAT CGCGGTGGAA GGATTTTGCG CAGGTCGTCG CAAGCGGAAA ACGCGCCGTG TCGCGCTATG ATGGCTTGGT CTATTGGGAT CACAACTGGC GCAAGGCTGG AGGCTCGGCG CGGGCCGTGG AGATCGCCAA GCGTGAGAAA TTCTACCAGC AATCCTATTG CGGTTGTCTG TACTCGCTGC GCGACGCCCA TCATCGACGC GGCATTGCGC AGCGATCGTA G
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Protein sequence | MAMNEVRRPA LSLPAGHAKV LLHSCCAPCS GEVMEAMLAA GIDYTVFFYN PNIHPEREYL LRKDENARFA ARHGVAFVDA DYDDALWLAR TKGLECEPER GERCSICFDM RLERTALYAY EHGFSVITSS LGISRWKDFA QVVASGKRAV SRYDGLVYWD HNWRKAGGSA RAVEIAKREK FYQQSYCGCL YSLRDAHHRR GIAQRS
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