Gene RPC_3506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3506 
Symbol 
ID3973198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3895717 
End bp3896580 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content65% 
IMG OID637926618 
Producthypothetical protein 
Protein accessionYP_533365 
Protein GI90424995 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.151747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGG CGCGGACCCG CCAGCGTCGG GACGGCAACG TTCCGGCTGA CATTCCGGTT 
GCGATCGGGG CGGCGCAAAC GGTGCCCGGA CGGAGAGGCT TACGCCACGC TTCCGAGGTG
GCTCCGACCG ACGGCTCAGT GCGGCGCCCG GTCTGGCCGT TGCGAGGAGC GCCCGAGGGA
TTGTGGTGGC GGCTCAAATT CAGGTTTTGG CGCGGATTGG AAGCGGCTGT CGGCTGGATT
GTTCTGGATC GTGCGCATCG CCGCGAAGTG CAGCAATCGG CGATTTCGCG CGTGGGCGCG
GATGACGATT TCAGTCGGCG ACAACTAAGT GTCGGACACG GCTGTCCGGG TCCGGATCTT
CTGGTCGGGT CGGCGGATGC CGCTGGTCCG TCCTCGCATC GTGAGCCGGG GCCCCGTCAG
ATTGAAGTTT GCATCGTCGG CAACGGCACG GCGACGATGG AGTTGATCCG CTACCTGGTC
ATGCTGGGCG CAAATGTTCA CGCGACGGCC GAGACGGTGG AAGACTACGT CTTGCTAACC
GCAGAAGGCG CGACGCCACA TCGTTTTGAG GATCTGCCGG CGGTGGCGAC CGGGCTCGAC
GTTCTGATCT CGACCAGCCT GTCATGGTTT GTCGGAGCCA GCATCATCGC CCGTCTGCCG
GAATGTGCCG TGATCGTCGA TACCGCCGGC CCGCCCGGCA GTTGCGATTT CGAGACCTCG
CGGCGGCTCG GGCGCGAGGT CCTCTGGGAA CATGATTTCC TTGCGTCGCC GTTGTCGGGA
GCGTCGGGCG AGACATGGAA GCTGATCCGC ACCCTGATTA GCAAGCAACA ACTTGACTCC
GCCGCTGCGC AGCCCGGCAA GTAA
 
Protein sequence
MSGARTRQRR DGNVPADIPV AIGAAQTVPG RRGLRHASEV APTDGSVRRP VWPLRGAPEG 
LWWRLKFRFW RGLEAAVGWI VLDRAHRREV QQSAISRVGA DDDFSRRQLS VGHGCPGPDL
LVGSADAAGP SSHREPGPRQ IEVCIVGNGT ATMELIRYLV MLGANVHATA ETVEDYVLLT
AEGATPHRFE DLPAVATGLD VLISTSLSWF VGASIIARLP ECAVIVDTAG PPGSCDFETS
RRLGREVLWE HDFLASPLSG ASGETWKLIR TLISKQQLDS AAAQPGK