| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3498 |
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| Symbol | |
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| ID | 3973190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3887160 |
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| End bp | 3888704 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637926610 |
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| Product | major facilitator transporter |
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| Protein accession | YP_533357 |
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| Protein GI | 90424987 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.699034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGACG CTCTCAGGTC GAATATTCCG ACGATTGACG TGCCATCCTC TCCTCCGCAA
ACGCCCGTGC GCCGCTCCGC GATTCTCACG GTGATGGTGT CGTGCGCCGC GCTCGTGTTC
AGCCTTGGGG CAAGCCTGAA CCTTGCAATC GGGCGCATCT CCACAAGTGC GCTTCATCCG
TCCGCAACGG AAGTGCTGTG GATCGTCGAT ACCTATCTGG TTGTTTTCGG GTGCCTGCTG
ATTCCGGCTG GAGCCATCGG CGATCGATAC GGCCGCAAGC TGGCCATGCT GGCCGGCCTT
GCATGTCTAG GTGTCGGCTC ACTGCTCTCC GCAACCGCGG CCACCGTGCC GATGCTGCTG
GTCGGTCGGG TGATCGCCGG CGCAGGGGCG GCACTGATTC TGCCGAACAG CCTCGCTCTC
CTTTTGCATA TCTATCCGGC CGACCAGAAA TCTCACGCCA TTGCGATGTG GACGGCGATG
ACCGGTCTAG GCGGCGCACT TGGGAATGCC CTCGGCGGCC TCGTCATGCA GTTTGCCGAA
TGGCAGGCCA TCTTTGCGGT CTCAGTGCCG TTCGCAATGA TAGGTTTTCT CCTGACGGCG
TGGCTCGCGC CGCGTCAGGC AGGCCACCAG CACCCGATCG ATTTTTTGGG CGCCGGCATC
CTGATGCTCG GCATCTTCGC CCTGTTGACC GGCCTCATCG AAGGGCAGGA CCAGGGCTGG
GCGTCGGCGG AGGTTATCGG CAGTTTCGGC GCGGCGGTTT TGATCTTGGC TCTGTTTCTC
TGGAGCTCAG CGAAGCGGAA GCATCCGGTC GTAGATCCAC GAATCTTCAA AACGCCCGGC
CTCCGCGCGG GGATGCTGGG CGTCACGGCA TCGTTCATCG GCATGTATTC GATGTTCTAC
CTGAACGGTC AATATCTGAT GAGCGTAAAG GGCTATCCGC CGCTCCTCGC CGGCCTTGCG
ATACTCCCGC TCGTTGCTGT GTTGTTCTGG GTTTCTCCGC GAAGTGTCAA GCTCGCCCGG
CATCTTGGTG CGCGAACGGT GGTGACGGTC GGGCTTGCGC TGTTGATTCT GGGCCTAGGT
CTTCTGCGGC TCTGCGGGCC GGACTCCTCA TACTGGCTGT TCGCGCTCAG TATCTGCGTT
GTTGGCGTCG GTATCGGCTT GTCAAATCCC GTTCTTTCGA CGGCAATCAT CGGCTCGCTG
CCGCCGCATC AAGCAGGCGT CGGTTCCGGC ATCAACAGCT TTGCGCGGGA AATTGGTGGC
GCGTTAGGCG TCGCTCTCTT CGGCAGCTTA TTGGGAACCG CACTCCCGTC ATATTTGCCC
GATTCCCTCG CTGACGCGCC CAGCCGCGCG AAGCAAACCG TTGGCGCTGC CTTGGCCTAT
GTCGATGCTG TTCCTGCTCT GAGCAATCAA GTCCACGTTG TGCGCGAGGC ATTTGCGGGG
GCGACGGCAC AATCTCTACT GGTCGTAATG CTGCTGTTGG GTGTCGCGAC TTTGGTAGTC
GCATTGTGGT ATCCAGTCAG CCCGAAGGAG CCGCGCGGCG GGTAG
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| Protein sequence | MSDALRSNIP TIDVPSSPPQ TPVRRSAILT VMVSCAALVF SLGASLNLAI GRISTSALHP
SATEVLWIVD TYLVVFGCLL IPAGAIGDRY GRKLAMLAGL ACLGVGSLLS ATAATVPMLL
VGRVIAGAGA ALILPNSLAL LLHIYPADQK SHAIAMWTAM TGLGGALGNA LGGLVMQFAE
WQAIFAVSVP FAMIGFLLTA WLAPRQAGHQ HPIDFLGAGI LMLGIFALLT GLIEGQDQGW
ASAEVIGSFG AAVLILALFL WSSAKRKHPV VDPRIFKTPG LRAGMLGVTA SFIGMYSMFY
LNGQYLMSVK GYPPLLAGLA ILPLVAVLFW VSPRSVKLAR HLGARTVVTV GLALLILGLG
LLRLCGPDSS YWLFALSICV VGVGIGLSNP VLSTAIIGSL PPHQAGVGSG INSFAREIGG
ALGVALFGSL LGTALPSYLP DSLADAPSRA KQTVGAALAY VDAVPALSNQ VHVVREAFAG
ATAQSLLVVM LLLGVATLVV ALWYPVSPKE PRGG
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