Gene RPC_3497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3497 
Symbol 
ID3972864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3886216 
End bp3886917 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content70% 
IMG OID637926609 
Producthypothetical protein 
Protein accessionYP_533356 
Protein GI90424986 
COG category[R] General function prediction only 
COG ID[COG3571] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.427254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCGC CACGCGCCAC AGCCGTGACA ATCGGCGGCG AGACGCCGCT GTCGGCGCTG 
CTACTGAAGC CGGCCAAGGC GCGCGCCTGT TACGTCTTCG CGCACGGCGC CGGTGCCGGC
ATGTCGCACA TTTTCATGGA ACAGGTCGCG ACCGGGCTGT ACGCGCGCGG CATCGCCACG
CTGCGCTATC AGTTTCCGTT CATGGAGAAG GGCAGCAAGC GCCCGGATTC GCCGGCGGTC
GCGCAGACCG CGGTGCGCGC CGCGGTCGCC GAGGCCGCGC GGCGCTGCCG CGGCTGTCCG
CTGATCGCCG GCGGCAAATC GTTCGGCGGA CGCATGACCT CGCAGGCGCA GGCCTTGCTG
CCGCTCGAGG CCGTGCAAGG CCTCGCCTTT CTGGGCTTTC CGCTGCACCC GTCCGGCAAG
CCTTCGGTGA CGCGGGCCGA GCACCTGGCC GAAATCGAGA TCCCGATGCT GTTCATCCAG
GGCACCCGCG ACAAGCTCGC CGAACCGGGC CTGCTCGGTC CCGTCGTCCA AGGCCTCGCC
TCGATCGCGA CGCTGCACTG GATCGAGCAG GCCGATCACG GCTTCCACGT CCCGGCCCGC
TTCGGACGCA GCGACGGCGA GGTCATGACG GAGCTTCTCG ACGGCTTCGC GAACTGGCTG
GAGAGTCGTG CGAAGTCGAG AGCGGTGTTG GTGCGCGCGT AG
 
Protein sequence
MTAPRATAVT IGGETPLSAL LLKPAKARAC YVFAHGAGAG MSHIFMEQVA TGLYARGIAT 
LRYQFPFMEK GSKRPDSPAV AQTAVRAAVA EAARRCRGCP LIAGGKSFGG RMTSQAQALL
PLEAVQGLAF LGFPLHPSGK PSVTRAEHLA EIEIPMLFIQ GTRDKLAEPG LLGPVVQGLA
SIATLHWIEQ ADHGFHVPAR FGRSDGEVMT ELLDGFANWL ESRAKSRAVL VRA