| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3491 |
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| Symbol | |
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| ID | 3972858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3877661 |
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| End bp | 3879250 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637926603 |
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| Product | hypothetical protein |
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| Protein accession | YP_533350 |
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| Protein GI | 90424980 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.704588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAGGC CCGTGTCCCC CGCGACGTCG AGCGCGCAGA CCATGACCGG TGCCGACCGG
TTGTGCGACG CGCTGCTCGC CCACGAGGTC GACGTCTGCT TCGCCAATCC AGGCACCTCG
GAAATGCATT TCGTTGCGGC GCTGGATCGC CAGCCGCGCA TGAAGTGCAT CCTCGGCCTC
TTCGAGGGCG TCGTGACCGG CGCCGCCGAC GGCTATGCGC GGATGCGCGA CCGCCCGGCG
GTGACGCTGC TGCATCTCGG CCCCGGCCTC GCCAACGGCT TGGCCAATAT CCACAACGCG
CGGCGCGCCA ATTCGCCGAT GATCAACATC GTCGGCGATC ACGCGGTCGA GCATCTGCCG
CTGGATTCGC CGCTCACCAG CGACATCGAC TCCTTGGCGC GGCCGATGTC GCGCTGGGTG
CGCCGCATCG CCGACCCGGT GCAGATCGAC AGCGACGTCG CCGAGGCCTG GTCGCAGAGC
CTGACGCCTG GCATTTCCAC GCTGATCCTG CCCGCCGACA TGGCGTGGAA CGAGCATCGC
TACACCGCGG CGTTGGCGCG CGGCCAGCGG CCGCAGCGCG AGCCGCTCAA CCCGGACAGC
ATCACCCGGA TCGGCGCGGC GCTGCGCGGC AAGCGCAAGG TGGCGCTGCT GCTCACCGGC
GCGGCGCTGC GCGACGCGCC CTTGCAGCTC GCCGCCCGCA TCAGCAGCGC CACCGGCGCG
GAAATCTTCG CGCAGGGCGC CAACGGCCGG ATCGAGCGCG GCCGCGGCCG GACGCCGATC
GCGAAGTTGC AGCTCACCCA CGAGGTCGGC GGCCGGATGC TGCGCGATGT CGAGATGCTG
GTGCTGATCG GCAGCCAGGA GCCGGTGTCG TTCTTTGCCT ATCCGAACCA GCCGGGCCGG
CTGGCGCAGC CGTCGTGTGA GATCGTGCAG CTGGCGCGTG CCGATCAGGA TCTGGTGCAG
GCGCTGCAAT GGCTGGCCGA CGAGGTCAAA GCGCCGGCAT CGCCGCTGGC CTTGCCCGCG
CCGACGGCTG CTGCGCCGGT CGGGCCGGGC GACGCGCTGA CCATTGCCGC GGTGAACCGG
CTGGTCGCCG ACCGGCTGCC CGAACAGGCG ATCGTCTGCG ACGAGGCGCT GACCTCGTCG
GGCTTCTACG ATTGCTCCTA CGAGTCCGAG CCGCACGATT ATCTGCAGAT CACCGGCGGG
GCGATCGGCA TCGGCATTCC GATGGCGGCG GGCGCCGCGG TGGCCTGCCC GAACCGCAAG
GTGATCAACC TGCAGGCCGA CGGCAGCGGC ATGTACACCG TGCAGGGGCT GTGGACCCAC
GCCCGCGAAA ATCTCGACGT GCTGACCATC GTGTTCTCCA ACCGCTCCTA CGCGACGTTG
TGGGGCGAGA TGCACAAGGT CGGCGCGCAG GTGCCGGGCC GCAACGCCGA GCGGATGCTG
CGGCTGGATC AGCCGGACCT CGATTGGGCC AAGCTCGCCG AGGGCATGGG CGTCGAGGCC
AGCCGCGCCG CCACCGTCAC CGCATTTTCC AAAGCGCTCG ATGCCGCGCT GAGCCGCCGC
GGCCCCTGCC TGATCGAGGC CATCGTTTGA
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| Protein sequence | MDRPVSPATS SAQTMTGADR LCDALLAHEV DVCFANPGTS EMHFVAALDR QPRMKCILGL
FEGVVTGAAD GYARMRDRPA VTLLHLGPGL ANGLANIHNA RRANSPMINI VGDHAVEHLP
LDSPLTSDID SLARPMSRWV RRIADPVQID SDVAEAWSQS LTPGISTLIL PADMAWNEHR
YTAALARGQR PQREPLNPDS ITRIGAALRG KRKVALLLTG AALRDAPLQL AARISSATGA
EIFAQGANGR IERGRGRTPI AKLQLTHEVG GRMLRDVEML VLIGSQEPVS FFAYPNQPGR
LAQPSCEIVQ LARADQDLVQ ALQWLADEVK APASPLALPA PTAAAPVGPG DALTIAAVNR
LVADRLPEQA IVCDEALTSS GFYDCSYESE PHDYLQITGG AIGIGIPMAA GAAVACPNRK
VINLQADGSG MYTVQGLWTH ARENLDVLTI VFSNRSYATL WGEMHKVGAQ VPGRNAERML
RLDQPDLDWA KLAEGMGVEA SRAATVTAFS KALDAALSRR GPCLIEAIV
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