| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3489 |
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| Symbol | |
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| ID | 3972856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3875007 |
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| End bp | 3876029 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637926601 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_533348 |
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| Protein GI | 90424978 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTGA TGGCGCTGGA TACGAAGGTG GGCCGCGGCG TCGCCGTGGC CCTGGCGATC
GCGGGCTGGT TCGCGCGGTT CGTCGCGGTG GTGCTGGTGA TCGCGACGTT CAACTTTGTT
CTGGTGCACG CCGCGCCCGG CGATCCGGCG CAGGTGATCG CCGGCCAGAG CGGCTCGGCG
GACGCCAAAT TGCTGGCGCA GCTGCGCGCC GAATACGGCC TCGACAAGCC GTATCCGGTG
CAACTCGCCA CCTATCTGAA ACGCATCGTG ACGCTCGATC TCGGCTATTC CTATCGCCAG
CAGCGCAGCG TGCTGTCGCT GCTCGGCGAG CGGCTGCCGG CGACCTTGCT GTTGACCTGC
ACGGCGTTCT TTCTGGCGCT GGCCGCCGGC GTGCTGCTCG GCACGTTGGC CGGAATGCGC
GCCGGCAAAT GGAGCGACAC CGCGCTGACC ATCGTGTCGC TGCTGCTCTA CGCCATGCCG
GTGTTCTGGC TCGGGCTGAT GCTGGTGCTG CTGTTCTCGG TCAAGCTCGA TTGGCTGCCG
GCGTTCGGCT ACGTCACCAT CGGCGTCGAG ATGACGGCGT TCGAGCGGAT GCGCGACGTC
GCCTCGCATC TGGTGTTGCC GGCGGTATCG CTCGCGGCGG TGCATATGGC GATCTACGCC
CGGCTGATGC GCTCCTCGGT GATCGAACTC GCGCATCAGG ACTTCATCAA GACCGCGCGC
GCCAAGGGCT TGAAGCAGGG CCGCATCGTC GCCCATCACA TCCTGCGCAA CGCCATCCTG
CCGGTGGTCA CGGTGGCCGG GATGCAGGCC GGCGCGCTGG TCGGCGGCGC GGTGGTGATC
GAGACGGTGT TCGCCTGGCC GGGGCTCGGC CGGTTGACCT ACGACGCGGT GCTGCAGCGC
GACTATCCGG TGATGCTCGG CATCTTCCTG ATGATGTCGG TGATCGTCAT CCTGCTCAAC
CTGGTGACCG ACGCGATCTA TCGGCTGGTC GATCCGCGCG TCTCGCTGCG TGCGGCCTCA
TGA
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| Protein sequence | MSVMALDTKV GRGVAVALAI AGWFARFVAV VLVIATFNFV LVHAAPGDPA QVIAGQSGSA
DAKLLAQLRA EYGLDKPYPV QLATYLKRIV TLDLGYSYRQ QRSVLSLLGE RLPATLLLTC
TAFFLALAAG VLLGTLAGMR AGKWSDTALT IVSLLLYAMP VFWLGLMLVL LFSVKLDWLP
AFGYVTIGVE MTAFERMRDV ASHLVLPAVS LAAVHMAIYA RLMRSSVIEL AHQDFIKTAR
AKGLKQGRIV AHHILRNAIL PVVTVAGMQA GALVGGAVVI ETVFAWPGLG RLTYDAVLQR
DYPVMLGIFL MMSVIVILLN LVTDAIYRLV DPRVSLRAAS
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