Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3488 |
Symbol | |
ID | 3972855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3874154 |
End bp | 3874993 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637926600 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_533347 |
Protein GI | 90424977 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACGC TCAAAGCTTT CCTGCGCCAC CCGACCGGCC TGATCGGCTT CGTCATCCTG CTCGCGGTGA TCGCGCTCGC GGCGGCGGCG CCGGCGCTGT TTCCCGAGGA TCCCTGGGAA ATGATCGGCG CGCCGTTCCA GCCGCCGTTC AGCGAGGGGC TGTGGCTCGG ATCCGACATG CTCGGCCGCG ACATCGCCGC CGGCATCGCC CACGGCGCGC GGGTGTCGCT CTCCATCGGC GTCGCCTCGA CGCTGGCCGC GGTGTGCATC GGCGTCGTGG TCGGCGCCAT CGCCGGCTAT TTCGGCGGCA AGGTCGACGA CCTGATGATG CGCGTCACCG AACTGTTCCA GACCATCCCC GGCTTCATCC TGGCGATCCT GCTGGTGGCG ACGCTGGGGC CGACGCTGAG CAACGTCATC ATCGCAATCG GCGCGGTGAG CTGGCCGCCA TTGGCGCGCC TGACCCGCGC GGAGTTTCTG CGGCTGCGCG GCCGGGAATT CGTCCAGGCC GCGGTGTGCC AGGGCCAGCC GCCGATGGTG GTGGTGCTGC GCCACATCCT GCCCAACGCG ATCTCGCCGA TCATCGTCAC CGGTTCGCTG ACCATCGCCA CCGCGATCCT GATCGAGAGC GCGCTGAGCT TCCTCGGGCT CGGCGATCCC AACCTGATGT CCTGGGGCTT CATGATCGGC GCCTCGCGCA CCGTGATGCG CCAGGCCTGG TGGATGAGCG TGTTTCCCGG CATCGCCATC CTGCTCACCG TGCTGGCCAT CAATCTGGTC GGCGAGGGAC TGAACGACAC GCTGAACCCG CGCATCTCCC GAAGGGGCCG AACCGTATGA
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Protein sequence | MDTLKAFLRH PTGLIGFVIL LAVIALAAAA PALFPEDPWE MIGAPFQPPF SEGLWLGSDM LGRDIAAGIA HGARVSLSIG VASTLAAVCI GVVVGAIAGY FGGKVDDLMM RVTELFQTIP GFILAILLVA TLGPTLSNVI IAIGAVSWPP LARLTRAEFL RLRGREFVQA AVCQGQPPMV VVLRHILPNA ISPIIVTGSL TIATAILIES ALSFLGLGDP NLMSWGFMIG ASRTVMRQAW WMSVFPGIAI LLTVLAINLV GEGLNDTLNP RISRRGRTV
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