| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3487 |
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| Symbol | |
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| ID | 3972854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3872499 |
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| End bp | 3874157 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637926599 |
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| Product | ABC transporter related |
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| Protein accession | YP_533346 |
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| Protein GI | 90424976 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG ATGTCCTGCT GTCGATCGAG AATCTGTCGG TGGCGCTGCC GCAGGGTGGC
GACCGCGGCT TCGCGGTGGA GGAGGTGTCG CTGAGCGTGC GCCGCAACGA GATCGTCTGC
CTGGTCGGCG AATCCGGCTC CGGCAAGTCG ATCACCGCGC ACGCCGTGCT GCGGCTGTTG
CCCGCCAACC TCGACGTCGC CTCCGGCGCC ATCCGCTTCC ATGGTGCCGA CCTCGCCGCC
GCCGACGAGG CCACCATGCG GGGCTTGCGC GGCGGCCCGA TCTCGATGAT CTTCCAGGAG
CCGCTCTCCG CACTCAATCC GCTGGCGCGG GTCGGCGATC AGATCGCCGA AGCCATCCTC
ACCCACACCA AGCCGCGGCC GAGCAAAGCC GCGCTTGACG CAAGGGTGCT GGAACTGGTC
GCCGCGGTCG GCTTACCGGA CCCGGCGACG CTGGTGCGCA GCTATCCGTT TCAATTGTCG
GGCGGCCAGC GCCAGCGCAT CATGATCGCG ATGGCGATGT CGAACAACCC GGCGCTGCTG
CTCGCCGACG AGCCGACCAC CGCGCTCGAC GTCACCACCC AGAAGCAGAT CCTGCTGCTG
ATCCGCAAAT TGCAGGCCGA GCGCGGCATG GGCGTGTTGT TCATCACCCA TGATTTCGGC
GTCGTCGCCG ACATCGCCGA CCGCGTCGTG GTGATGCGCG GCGGCCGCGT GGTCGAGCAG
GGCAGTGTCG ACGAGGTGTT GCGCGCGCCG AAGGATGACT ACACCAAGGC GCTGATCGCC
GCGGTGCCGG GCTCGCGGCC GGCCTCGACC CTCGATCGCG GCATCGGCGG CGACCCGTTG
CTCGACGCGC AGGGTCTGAA CAAGAGCTTC GTCACCGGAC AGGGGCTGTT TCGCCCGGAT
CGCCGGGTCG CGGCGGTGCA TGACGTAGCG CTGACGTTGC GGCCGCGTGA GACCGTGGCG
GTGGTCGGCG AATCCGGTTC CGGCAAATCG ACGCTCGGCC GCATCATCAT GCGGCTGATC
GAGCCCGACA GCGGCGCGAT CGATTTCGAC GGCACGGATT TCCTTCAGCT GCGCGGCGTG
CAGCTGCGCT CGATGCGCCG CAAGGTGCAG ATCGTGTTCC AGGACCCTTA TGCGGCGCTC
GACCCGCGGC AGAAGGTCGG CGACGCCATC GCCCGCGGGC CGATGGCTTA CGGCGTGCCG
GCGGTCGAGG CGATCGCCGA CGCCAAGCGG CTGTTGGCCC GCGTCGGCCT CAAGGACAGC
GCCATTGAAC GCTATCCGCA CGAATTTTCC GGCGGCCAGC GGCAACGCAT CTGCATCGCC
CGGGCACTGG CGCTGAAGCC CCTGGTGCTG GTGGCGGACG AAGCGGTCTC CGCGCTCGAC
GTCTCGGTGC AGGCGCAGAT CCTGGCGCTG CTCGCCGAAC TGCGCGAGGA GATGAATTTG
GCGATGCTGT TCATCACCCA TGATCTGCGG GTGGCCGCCG AAATCGCCGA CCGCATCGTG
GTGATGCGGC GCGGCGAGAT CGTCGAGCAG GGCGAAACCC GCTCGGTGTT CAGCGCGCCG
CAGCACGCCT ATACCCGCGC GCTGCTCGAC GCGATTCCGG GGCGCAGCCT GTTCGCCGGT
CCGCAGGCGG TGGAGCTGCC AGGCGCTATG ATCGCCTGA
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| Protein sequence | MTDDVLLSIE NLSVALPQGG DRGFAVEEVS LSVRRNEIVC LVGESGSGKS ITAHAVLRLL
PANLDVASGA IRFHGADLAA ADEATMRGLR GGPISMIFQE PLSALNPLAR VGDQIAEAIL
THTKPRPSKA ALDARVLELV AAVGLPDPAT LVRSYPFQLS GGQRQRIMIA MAMSNNPALL
LADEPTTALD VTTQKQILLL IRKLQAERGM GVLFITHDFG VVADIADRVV VMRGGRVVEQ
GSVDEVLRAP KDDYTKALIA AVPGSRPAST LDRGIGGDPL LDAQGLNKSF VTGQGLFRPD
RRVAAVHDVA LTLRPRETVA VVGESGSGKS TLGRIIMRLI EPDSGAIDFD GTDFLQLRGV
QLRSMRRKVQ IVFQDPYAAL DPRQKVGDAI ARGPMAYGVP AVEAIADAKR LLARVGLKDS
AIERYPHEFS GGQRQRICIA RALALKPLVL VADEAVSALD VSVQAQILAL LAELREEMNL
AMLFITHDLR VAAEIADRIV VMRRGEIVEQ GETRSVFSAP QHAYTRALLD AIPGRSLFAG
PQAVELPGAM IA
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