Gene RPC_3479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3479 
Symbol 
ID3972846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3864579 
End bp3865367 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content68% 
IMG OID637926591 
Productphosphoglycerate mutase 
Protein accessionYP_533338 
Protein GI90424968 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATC CCGCCAAGCC TGCTGACGTG ACGATTCCCG AGGTCGAGCC GTCCGGCGTG 
AAGCCGCCCT TCGTTGCGCA ACACGCGATC CCGGCCGGTG TGGTCGCAAC GCGGTGGTGG
TGGGTGCGGC ACGCACCGGT GCGCGAGGAC GGCGGCTGCA TCTACGGTCA GTCCGACATC
GGCTGCGACA CCAGCGACCG CGTGGTGTTC GACGCGGTCG GCCGCGTGCT GCCGCGCAAC
GCGGTGTGGT ACGCGAGCAC GTTGCGGCGC ACCCATCAGA CCGCCCACGC GATCTGGGAC
GCCGGCTTTC CGAGGCCAGG GGAGCTGGTG CACGAGGCCG GGCTGGCCGA GCAGCATCTC
GGCGACTGGC AGGGACTGAA CCGCGCCGAA TTCTTTGCCA GCCGCCCGAT CGCGGTCGGC
AGCTATTGGT TCGCCCCGAT CGACGACCCG GCGCCGAATG GCGAGAGTTT CATGGACCTG
TACAATCGCG TCGCCAATGC CATTCGGCGC ATCACCGAAA CGCACGCCGG CCGCGACGTG
ATCGCGGTCG CGCACGGCGG ATCGATCAAG GCGGCGATCG GCCTGGCGCT CGGCAACCAG
CCGGAGCGCG GCCTCGCTTT CACCATCGAC AATTGCTCGA TCACAAGACT CGATCATCTT
TCCAGCGCCG GACACAGCGG CTGGCGGATT CCGATGGTCA ATCAGCAGCC GTGGATCGCC
GATCCGTCGC ACGCCGCCAT GCATCAGCCC GCCGGTGCGG AAGTCGGAAC GCCGAACAAG
CTGGGCTGA
 
Protein sequence
MSDPAKPADV TIPEVEPSGV KPPFVAQHAI PAGVVATRWW WVRHAPVRED GGCIYGQSDI 
GCDTSDRVVF DAVGRVLPRN AVWYASTLRR THQTAHAIWD AGFPRPGELV HEAGLAEQHL
GDWQGLNRAE FFASRPIAVG SYWFAPIDDP APNGESFMDL YNRVANAIRR ITETHAGRDV
IAVAHGGSIK AAIGLALGNQ PERGLAFTID NCSITRLDHL SSAGHSGWRI PMVNQQPWIA
DPSHAAMHQP AGAEVGTPNK LG