| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3471 |
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| Symbol | rplA |
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| ID | 3971756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3855380 |
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| End bp | 3856072 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637926582 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_533330 |
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| Protein GI | 90424960 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.409515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCG GAAAACGTTT GAAGAAGGCC CGTGAAGGCG TCGATCGCGA GAAGCTCTAT
CCGCTCGCCG ACGCCATCAA GATGGTGAAG GAACGCGCCG TCTCGAAGTT CGACGAGACC
ATCGAAATCG CCATCAATCT CGGCGTCGAT CCGCGTCACG CCGACCAGAT GGTGCGCGGC
GTGGTGACGC TGCCGAACGG CACCGGCCGC ACCTTGCGCG TCGGCGTGTT CGCGCGCGGC
GCCAAGGCCG ACGAAGCCCG GGCTGCCGGC GCCGACGTGG TCGGTGCGGA AGACCTGGTG
GAGAAGGTGC AGGGCGGCAC GATCGAGTTC GATCGTTGTA TCGCCACGCC CGACATGATG
CCGCTGGTCG GTCGTCTCGG TAAGGTGCTC GGCCCGCGTG GCATGATGCC GAACCCGAAG
ATCGGCACCG TCACCATGGA CATCACCAAC GCCGTCAAGG GCGCCAAGGG CGGTTCGGTC
GAGTTCCGCG TCGAGAAGGC CGGCATCGTG CAGGCCGGCA TCGGCAAGGC CTCGTTCGGC
GAGGACAAGC TGGTCGAGAA CATCAAGGCG CTGACCGACG CGGTTTCCAA GGCGAAACCC
GCCGGTGCCA AGGGCACCTA CATCCAGCGC GTCGCGGTCT CCTCGACGAT GGGCCCGGGC
GTCAAGGTCG AGCCGGGCAG CATCCTCGGC TGA
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| Protein sequence | MAIGKRLKKA REGVDREKLY PLADAIKMVK ERAVSKFDET IEIAINLGVD PRHADQMVRG
VVTLPNGTGR TLRVGVFARG AKADEARAAG ADVVGAEDLV EKVQGGTIEF DRCIATPDMM
PLVGRLGKVL GPRGMMPNPK IGTVTMDITN AVKGAKGGSV EFRVEKAGIV QAGIGKASFG
EDKLVENIKA LTDAVSKAKP AGAKGTYIQR VAVSSTMGPG VKVEPGSILG
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