| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3470 |
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| Symbol | |
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| ID | 3971755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3854333 |
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| End bp | 3855295 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637926581 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_533329 |
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| Protein GI | 90424959 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGCA AGGTTCTGAT CTATTCCCCG TTCTCGAAAG CGATGCTGAC GCGGATCGCC
GCGCGCTTCG AGCTGATCGA CGCCGAAGGC AAACTGCCGC GCGAGGCGTT CAGCGCCGAC
GAGCTCGGTG ACGTTCGCGC GGTGATCACC GCCGGCGCCG AGCCGCTCGG CCGCGCGGTG
ATGCAGAGCC TGCCGAAGCT CGGCGCGATC GTCTGCTACG GCACCGGCTT TGACGGCATC
GACCGCGCCG CCGCGGCCGA GCGCGGCATC GTGATCGGCC ACAGCCCGGC GGCCAATGCG
GCGGCGGTCG CGGACCTGGC GATGACGCTG CTGCTGGCGG TGACACGGCA GTTACTTCCG
GCCGACGCTT ACATCCGCAG CGGCGGCTGG GCGGCGGGGC AGCCGTCGCT GCGGTTGGCG
CCGCCACGCG GAATGACCGG CCGCCGCGTC GGCGTCTACG GCATGGGCGA GATCGGCCGC
AAGATCGCGG CGCGTGCCGC TGCGTTCGAG ACCGAGGTCG GTTACTACAG CCGCTCGCAG
CACGACGTGC CTTATACTTA TCATGCGAGC CTGGAAGCGC TGGTCGAGTG GTGCGACGTG
CTGATGATCG CGGTGCGCGC CGGCCCCGCG ACACGGCACA TCATCGACGC CGCGATGCTG
CAGCGGCTCG GCCAGGGCGG CATCGTGATC AACATCTCCC GCGGCTCGGT GATCGATCAG
GCCGCATTGC TGGCGGCGCT GCAGGATCAC GCCATCGCCG GCGCCGGGCT CGACGTGTTC
GAGGTCGAGC CGCTCGCGCC GGGTGCGCTC AGTGCCTTGT CCAACGTGGT GCTGACCCCG
CATCTCGGCG GCCACACCGC CGAATCCCAC ATCGCGATGC AGGACTGCGT GATCGGAAAC
CTCGCGGCGT TCTTTGCCGG GCGGCCGCTG CCGCATCAGG TTGAGCTGGC GGCGCGCGCG
TAA
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| Protein sequence | MDGKVLIYSP FSKAMLTRIA ARFELIDAEG KLPREAFSAD ELGDVRAVIT AGAEPLGRAV
MQSLPKLGAI VCYGTGFDGI DRAAAAERGI VIGHSPAANA AAVADLAMTL LLAVTRQLLP
ADAYIRSGGW AAGQPSLRLA PPRGMTGRRV GVYGMGEIGR KIAARAAAFE TEVGYYSRSQ
HDVPYTYHAS LEALVEWCDV LMIAVRAGPA TRHIIDAAML QRLGQGGIVI NISRGSVIDQ
AALLAALQDH AIAGAGLDVF EVEPLAPGAL SALSNVVLTP HLGGHTAESH IAMQDCVIGN
LAAFFAGRPL PHQVELAARA
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