| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3455 |
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| Symbol | |
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| ID | 3972123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3831377 |
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| End bp | 3833494 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926566 |
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| Product | ABC transporter related |
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| Protein accession | YP_533314 |
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| Protein GI | 90424944 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0337574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCCCA AGCGACCCCC GTCGGACAAC GAAGATCGCG CGCCGGCGAC CGATCCGACG
TCGCCGCTCG ACAAGAAATT CGCCCTCCCG GTCGGCGTCT CCGCCAGCCC GGTGCAAGGC
ATCAAGCCGC CGGGACCGGG CAAGCCCGCG GCTCCCGCCA AGGTCAGTTC AGGCGGGGAG
AAGAAGCCGG CTGCCGACAA GAAGCCGGCG GGCAAACCCG CGCCCGACGA TGACGATGAC
GACGAAGCTG ACGATGGTCC CGAGATCGAC GACGATGACG ACGACGAGGA ACTGGTCGTT
TTCACCGCCA AGGAAGCCGC CGGCGCGCTC GCGACGATCT ACCGTTTCAC CAAGCCGTTC
CTGATCAATT ACAAGAAGAT CATCGTCTTC GTCTCGATCG GCGTGGTGAT CGAGACGTTG
TTCAACGTCA TCATGCCGCT CTCGCTGAAA TACCTGATCG ACGACGCGCT CGGCGAGGAG
GATTTCGAGG CGCTGATCAC CATCCTGTCG GTGCTGGCGG TGGCCGGCAT CTTCACCTCG
ATCGTCGCGG TGTGGTACGA GCGCTGGGAT GCGCGGCTGG CGGCGGCGGT GGTCGCCGAC
GTGCGCGGCC GGCTGTTCGA GCACATCCAG AATCTGCCCT CGGCGTATTT CGCCCGCACC
AAGCGCGGCG AGATCCTGTC GCGGTTCTCG ATCGATCTGT CGGCCTATGA AGGCTCGGTG
AAGAGCTTCT CCAACAGCGC GGCGCTGCCG TTCCTGGAAC TGATTGCCGG CATCGTGCTG
CTGCTGTTCT TGAACTGGCA GCTCGCCGCG GTGGCGCTGT TGGTGTTTCC GATCACGCTG
ATCGGGCCGC GGATCCTGAC GCCGAAGGCG GTGCAGGCCA ATTACGAGCA GAAGCAGCAG
GAATCCGCGC TGCTCGGCAT GGTGCAGGAA AACGTCGCAG CCCAGGCGGT GGTCAAGGCG
TTCAGCCTGC AGCGTAAGAT GCTCGGCTTC TTCCGGCTGC GCAACGACGA CGCGAGGCGC
AAGATCGCCG AGGCGACGTT CCTGTCGACC ATGGTGGAGC GCACCGTCAC CATCTCGGTT
TTGCTGTTGC ACCTCGTCGT GCTGGCGATC GGCGCCTACC TCGCCACCAA GGGCCAGATC
ACCGTCGGCA CCTTCGTCAC CTTCGAGAGC GCGTTCTGGG AGGTGTCGTA CAACATCGCC
CATGTGATGC ATTTCATCCC GGTGTCGATC GCCTCGGCGG CCGCGGTGCG CCACATCGAC
GAGCTGCTCG ACGAGCCGAC TCGCGGCGCC GACCTGCCGG CGGCGCCGGA ATTGCCGCGC
ATCACCCACG ACATCTCGTT TGAGCGCGTC AGCTTCAAAT ACGAGGGCAG CCAGACCCCG
GTGTTGGACA ACCTCAGCCT CAAGCTCGAC GTCGGCAAGA CCATCGCCAT CGTCGGCCCG
TCGGGCTCCG GCAAGAGCAC GCTGCTGAAC CTGATCCTGC GGCTGTATCT GCCGGACGAG
GGCCGGCTCA CCATCGACGG CGTCGACATC CGCAAGGTGA CGCGGGAGTC GCTGCGGCGC
TCGATGGCGG TGGTGTTCCA GGAGAACATG CTGTTCAACG TCTCGATCCG CGAGAACATC
CGGCTCGGCA AGGAGGACGC CAGCGACGAG GAAGTCGAGC AGGCGGCGCG CAAGGCCGAG
ATCCACCGCT ACATCATGAG CCTGCCGGAC AAATACGACA CCCAGGTCGG CGAGCGCGGC
GATACGCTGT CCGGCGGCCA GCGCCAGCGC ATCGCGATCG CCCGCGCCAT CATCCGCAAT
CCGTCGGTGC TGCTGCTCGA CGAGGCCACC TCGGCGCTTG ACCAGACCAC CGAGGCCGCG
ATCAACCGCA CGCTGCTGAA AGTCGCCAAG GACCGCACCA TGATCTTCTC CACCCACCGT
TTGACCTCGG TGGTGGAGAT GGACGAGATC ATCGTGATCT CCGGCGGCCG CGCCATCGAG
CGCGGCTCGC ACAAGCAGCT GCTGGCGGCC AACGGCATGT ACCGCCAGCT GTGGGACGAC
CAGAACCACG TGCCGCACCA GTCCGACACG CCGGCCGATG CCGACGACGA CGATGATGAC
GAGGACGACG ACGAGTAG
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| Protein sequence | MAPKRPPSDN EDRAPATDPT SPLDKKFALP VGVSASPVQG IKPPGPGKPA APAKVSSGGE
KKPAADKKPA GKPAPDDDDD DEADDGPEID DDDDDEELVV FTAKEAAGAL ATIYRFTKPF
LINYKKIIVF VSIGVVIETL FNVIMPLSLK YLIDDALGEE DFEALITILS VLAVAGIFTS
IVAVWYERWD ARLAAAVVAD VRGRLFEHIQ NLPSAYFART KRGEILSRFS IDLSAYEGSV
KSFSNSAALP FLELIAGIVL LLFLNWQLAA VALLVFPITL IGPRILTPKA VQANYEQKQQ
ESALLGMVQE NVAAQAVVKA FSLQRKMLGF FRLRNDDARR KIAEATFLST MVERTVTISV
LLLHLVVLAI GAYLATKGQI TVGTFVTFES AFWEVSYNIA HVMHFIPVSI ASAAAVRHID
ELLDEPTRGA DLPAAPELPR ITHDISFERV SFKYEGSQTP VLDNLSLKLD VGKTIAIVGP
SGSGKSTLLN LILRLYLPDE GRLTIDGVDI RKVTRESLRR SMAVVFQENM LFNVSIRENI
RLGKEDASDE EVEQAARKAE IHRYIMSLPD KYDTQVGERG DTLSGGQRQR IAIARAIIRN
PSVLLLDEAT SALDQTTEAA INRTLLKVAK DRTMIFSTHR LTSVVEMDEI IVISGGRAIE
RGSHKQLLAA NGMYRQLWDD QNHVPHQSDT PADADDDDDD EDDDE
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