| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3450 |
|---|
| Symbol | |
|---|
| ID | 3972118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 3825004 |
|---|
| End bp | 3826194 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637926561 |
|---|
| Product | elongation factor Tu |
|---|
| Protein accession | YP_533309 |
|---|
| Protein GI | 90424939 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0050] GTPases - translation elongation factors |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.939477 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAG CTAAGTTTGA ACGAAACAAG CCGCATTGCA ACATCGGTAC CATCGGTCAC
GTCGACCATG GCAAGACGTC GCTGACCGCG GCGATTACCA AGGTGTTGGC GGAAACGGGC
GGTGCGACGT TCACGGCCTA TGACCAGATC GACAAGGCCC CTGAAGAGAA GGCCCGCGGC
ATCACCATCT CGACCGCGCA CGTCGAATAC GAGACCGCGA ACCGGCATTA CGCCCACGTC
GATTGTCCCG GCCACGCCGA CTATGTGAAG AACATGATCA CCGGCGCGGC GCAGATGGAC
GGCGCGATCC TGGTGGTTTC GGCCGCCGAC GGCCCGATGC CGCAGACCCG CGAGCACATC
CTGCTCGCCC GCCAGGTCGG CGTGCCGGCG CTGGTGGTGT TCCTCAACAA GTGCGACATG
GTCGACGATC CGGAATTGCT CGAACTGGTC GAGATGGAAG TTCGCGAACT TCTCTCCAAG
TACGACTTCC CGGGCGACGA CATTCCGATC GTCAAGGGTT CGGCGCTGGC CGCTCTGGAA
AACAAGGACC CGAAGCTCGG TCATGACGCG ATCCTGGAGC TGATGAAGGC GGTCGACGCC
TACATCCCGC AGCCGGAACG CCCGATCGAC CAGCCGTTCC TGATGCCGGT GGAAGACGTG
TTCTCGATCT CCGGCCGCGG CACCGTGGTG ACCGGCCGCG TCGAGCGCGG CATCGTCAAG
GTCGGCGAGG AAATCGAAAT CGTCGGTCTG CGCGACACCC AGAAGACCAT CGTCACCGGC
GTGGAAATGT TCCGCAAGCT GCTCGATCAG GGCCAGGCTG GCGACAACAT CGGCGCGCTG
CTGCGCGGCA CCAAGCGCGA GGAAGTCGAG CGCGGTCAGG TGCTGTGCAA GCCGGGTTCG
GTCAAGCCGC ACACCAAGTT CAAGGCCGAG GCCTACATCT TGACGAAGGA AGAGGGCGGT
CGTCACACTC CGTTCTTCAC CAACTATCGT CCGCAGTTCT ACTTCCGCAC CACCGACGTC
ACCGGCGTCG TGCATCTGCC GGAAGGCACC GAAATGGTGA TGCCGGGCGA CAACATCGCC
ATGGAAGTTC ACCTGATCGT GCCGATCGCG ATGGAAGAAA AGCTGCGCTT CGCGATCCGC
GAAGGCGGCC GCACCGTCGG CGCCGGCGTG GTGGCCTCGA TCATCGAGTA A
|
|---|
| Protein sequence | MAKAKFERNK PHCNIGTIGH VDHGKTSLTA AITKVLAETG GATFTAYDQI DKAPEEKARG
ITISTAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI
LLARQVGVPA LVVFLNKCDM VDDPELLELV EMEVRELLSK YDFPGDDIPI VKGSALAALE
NKDPKLGHDA ILELMKAVDA YIPQPERPID QPFLMPVEDV FSISGRGTVV TGRVERGIVK
VGEEIEIVGL RDTQKTIVTG VEMFRKLLDQ GQAGDNIGAL LRGTKREEVE RGQVLCKPGS
VKPHTKFKAE AYILTKEEGG RHTPFFTNYR PQFYFRTTDV TGVVHLPEGT EMVMPGDNIA
MEVHLIVPIA MEEKLRFAIR EGGRTVGAGV VASIIE
|
|---|
| |