| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3449 |
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| Symbol | rpsJ |
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| ID | 3972117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3824601 |
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| End bp | 3824909 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637926560 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_533308 |
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| Protein GI | 90424938 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.852431 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGGCC AGAATATTCG CATCCGCCTC AAGGCGTTCG ATCATCGGAT CCTCGATTCG
TCGACGCGTG AGATCGTGAA CACCGCGAAG CGAACCGGCG CGCAGGTCCG TGGACCGATC
CCGCTGCCGA CGCGCATCGA GAAGTTCACC GTCAACCGTT CGCCGCACGT CGACAAGAAG
AGCCGCGAGC AGTTCGAGAT GCGCACCCAC AAGCGCCTCC TCGATATCGT CGATCCGACC
CCGCAGACCG TCGACGCTTT GATGAAGCTC GACCTGGCCG CCGGTGTCGA CGTCGAGATC
AAGCTTTAA
|
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| Protein sequence | MNGQNIRIRL KAFDHRILDS STREIVNTAK RTGAQVRGPI PLPTRIEKFT VNRSPHVDKK
SREQFEMRTH KRLLDIVDPT PQTVDALMKL DLAAGVDVEI KL
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