Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3436 |
Symbol | rplE |
ID | 3970191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3818445 |
End bp | 3819002 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637926547 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_533295 |
Protein GI | 90424925 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.160205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.543055 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAGA CCGCATACGT TCCGCGTTTA CGCGAGCAGT TCGACCGGGA AATCCGCGGC AAGCTGACCG AACAATTCGG TTATGCCAAT GTGATGCAGG TTCCGCGGCT CGACAAGGTG GTGCTCAACA TGGGCATCGG CGAGGCCGTC AACGACCGCA AGAAGGCGGA GACGGCGGCT GCCGATCTCG CGCTGATCGC CGGCCAGAAG CCGATCGTGA CCTATTCGCG CGTCGCCATC GCGACCTTCA AGCTGCGTGA AAACCAGCCG ATCGGCGCCA AGGTGACGCT GCGCAAGGCC AAGATGTACG AGTTCATCGA CCGGCTGATC AACGTCGCGC TGCCGCGCGT CCGAGATTTC CGCGGGCTGA ACCCGAAGAG CTTCGACGGC CGCGGCAACT ACTCGCTCGG CATCAAAGAG CACATCATTT TCCCCGAAAT CGACTTCGAC AAGATGGGGG AGACGTGGGG TATGGACGTC ACGGTGTGCA CCACCGCACG CACCGACGAC GAAGCCCGCG CGTTGTTGAC AGCCTTCAAT TTCCCGTTCC GGCAGTGA
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Protein sequence | MAETAYVPRL REQFDREIRG KLTEQFGYAN VMQVPRLDKV VLNMGIGEAV NDRKKAETAA ADLALIAGQK PIVTYSRVAI ATFKLRENQP IGAKVTLRKA KMYEFIDRLI NVALPRVRDF RGLNPKSFDG RGNYSLGIKE HIIFPEIDFD KMGETWGMDV TVCTTARTDD EARALLTAFN FPFRQ
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