| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3431 |
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| Symbol | rpsE |
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| ID | 3970186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3816136 |
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| End bp | 3816708 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637926542 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_533290 |
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| Protein GI | 90424920 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.211149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.341232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGGTG AACGCGAACG CGGTGGAGGC CACCGGGGCC CCCGGGAAGA GCGCGACAGC
GAATTCGTCG ACAAGCTCGT CCACATCAAC CGGGTTGCGA AGGTCGTCAA GGGCGGCAAG
CGGTTCGGCT TTGCCGCGCT GGTCGTGATC GGCGATCAGA AGGGCAGGGT CGGTTTCGGT
CACGGCAAGG CGCGCGAAGT GCCGGAAGCG ATCCGCAAGG CGACCGAGTC CGCGAAGCGC
AATCTGACCC GCGTGCCGTT GCGCGAAGGT CGGACGCTGC ATCACGATAT CGCCGGCCGC
CACGGTGCGG GTCGGGTCTA TCTGCGTGCG GCCCCGGCCG GTACCGGCAT CATCGCCGGC
GGCCCGATGC GTGCGGTGTT CGAAACCCTC GGCATCCAGG ACGTGGTGGC GAAGTCGATC
GGCTCCTCGA ACCCCTACAA CATGGTTCGC GCCACTTTCG ACGCGCTGAA GCATCAGGAC
TCGCCGCGTT CGGTCGCGGC GCGCCGTAAC CTCAAGGTCT CCACCCTGCA GTCGCGCCGT
GTCGGTGGCG ACGCCGAAGT GGTCGCCGAA TAA
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| Protein sequence | MAGERERGGG HRGPREERDS EFVDKLVHIN RVAKVVKGGK RFGFAALVVI GDQKGRVGFG
HGKAREVPEA IRKATESAKR NLTRVPLREG RTLHHDIAGR HGAGRVYLRA APAGTGIIAG
GPMRAVFETL GIQDVVAKSI GSSNPYNMVR ATFDALKHQD SPRSVAARRN LKVSTLQSRR
VGGDAEVVAE
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