| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3428 |
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| Symbol | secY |
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| ID | 3970183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3813878 |
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| End bp | 3815209 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637926539 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_533287 |
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| Protein GI | 90424917 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.452831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.23727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTCTG CAGCGGAACA ACTTGCAGCC AATCTCAACT TCTCGGCGCT CGGTAAAGCC
GAGGAGTTGA AGAAGCGCAT CTGGTTTACC CTCGGTGCGC TGTTGGTCTA TCGGCTGGGC
ACCTACATTC CGCTGCCGGG CATCGACCCG CACATCTGGG ACCAGGTGTT CAAGTCGCAG
GCCGGCGGCA TCCTCGGCAT GTTCAACATG TTCGCGGGCG GCGGCATCAA TCGCATGGCG
ATTTTTGCCC TCAACATCAT GCCCTACATC TCCGCCTCGA TCATCATTCA GCTGCTGACG
ACGGTGTCGC CGCAGCTCGA AGCGCTGAAG AAAGAGGGCG AGTCGGGCCG CAAGACCATC
AACCAATACA CCCGCTATCT CACCGTGGTG CTCGCCGCGT TCCAGTCCTA CGGCATCGCC
GTCGGTCTGC AGGGCGCCGG CAACGTGGTC AGCGAGCCCG GGATGTTCTT CCTGATTTCG
ACCGCAGTGA CGCTGACCGG CGGCACCATG TTCCTGATGT GGCTCGGTGA GCAGATCACC
TCGCGCGGCA TCGGCAACGG CATTTCGCTG ATCATTCTCG CCGGCATCGT CGCCGAATTG
CCTTCGGCGC TGGCCGGGAT GCTCGAACTG GGCCGCCAGG GCGCGCTGTC GACCGGCATC
ATCCTGGTCG TGCTGGTGAT GGCCGTGGTC GTGATCGCCT TCATCGTGTT CATGGAGCGG
GCGCAGCGCC GGCTCTTGAT CCAGTATCCG AAGCGCCAGG TCGGCAACAA GATGTTCGAG
GGCCAGTCCT CGCATCTGCC GTTGAAGCTC AACACCTCGG GCGTGATCCC GCCGATCTTC
GCCTCGTCGC TGTTGTTGCT GCCCGCCACC GTGGCGAACT TCAACGCCGG CAGCGGCCCG
GAGTGGTTTC AGTGGATCAC CACCCAGCTC GGCCACGGCC GTCCGCTGTT CCTGTTGTTC
TACATCGGCA TGATCGTGTT CTTCGCGTTC TTCTACACCG CGATCGTGTT CAACCCGACC
GAGACCGCCG ACAATCTGAA GAAGCACGGC GGCTTCATCC CGGGCATTCG TCCGGGTGAG
CGCACCGCCG AATATATCGA TTTCGTGCTG TCGCGCATCA CCGTGATCGG CGCCGCCTAT
CTGGCGATCG TCTGCCTGAT CCCGGAAATC CTGATCTCCT ATGCGGCGGT GCCGTTCTAC
TTCGGCGGCA CCTCGTTGTT GATCGTGGTC AGTGTGACCA TGGATACGGT GGCCCAGGTG
CAGGGCTATC TGTTGGCGCA TCAGTATGAA GGACTGATCC GCAAGTCGAA ACTAAGGGGC
CGCCGCAAAT GA
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| Protein sequence | MVSAAEQLAA NLNFSALGKA EELKKRIWFT LGALLVYRLG TYIPLPGIDP HIWDQVFKSQ
AGGILGMFNM FAGGGINRMA IFALNIMPYI SASIIIQLLT TVSPQLEALK KEGESGRKTI
NQYTRYLTVV LAAFQSYGIA VGLQGAGNVV SEPGMFFLIS TAVTLTGGTM FLMWLGEQIT
SRGIGNGISL IILAGIVAEL PSALAGMLEL GRQGALSTGI ILVVLVMAVV VIAFIVFMER
AQRRLLIQYP KRQVGNKMFE GQSSHLPLKL NTSGVIPPIF ASSLLLLPAT VANFNAGSGP
EWFQWITTQL GHGRPLFLLF YIGMIVFFAF FYTAIVFNPT ETADNLKKHG GFIPGIRPGE
RTAEYIDFVL SRITVIGAAY LAIVCLIPEI LISYAAVPFY FGGTSLLIVV SVTMDTVAQV
QGYLLAHQYE GLIRKSKLRG RRK
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