| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3424 |
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| Symbol | |
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| ID | 3970179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3810682 |
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| End bp | 3811701 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637926535 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_533283 |
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| Protein GI | 90424913 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.127359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGATCC AGAAAAATTG GCAAGAACTG ATTCGGCCGA ACAAGCTCGT GGTCACGCCG
GGCTCCGACC CGACGCGTTT TGCGACCCTC GTTGCCGAAC CGCTCGAGCG CGGCTTCGGC
CAGACGCTGG GCAACGCGCT GCGGCGCGTG CTGCTGTCAT CGCTGCAGGG TGCCGCGGTG
CAGTCGGTTC ATATCGACGG CGTGCTGCAT GAGTTCTCCT CGATCGCCGG CGTGCGCGAA
GACGTTACCG ACATCGTGCT GAACATTAAG GACATCTCGA TCAAGATGCA GGGCGAAGGC
CCGAAGCGCA TGGTCGTGAA GAAGCAGGGT CCCGGCACCG TCACCGCCGG CGACATCCAG
ACCGTCGGCG ACGTCGTGGT GCTCAATCCG GACTTGCAGA TCTGCACGCT GGACGAGGGC
GCCGAGATCC GCATGGAATT CACCGTGGCC GGCGGCAAGG GCTACGTCGC CGCCGAGCGC
AACCGTCCCG AGGACGCGCC GATCGGCCTG ATCCCGGTCG ACAGCCTGTT CTCCCCGGTG
CGCAAGGTCT CCTACAAGGT CGAGAACACC CGCGAGGGCC AGATCCTCGA CTACGACAAA
TTGACCATGA CGATCGAGAC CAACGGCGCG ATCTCGCCGG ACGACGCGGT GGCCTATGCC
GCCCGCATCC TGCAGGATCA GCTCAACGTG TTCGTCAACT TCGAAGAGCC GCGCAAGGAA
GTCACCCAGG AGATCATCCC GGATCTGGCG TTCAACCCGG CGTTCCTCAA GAAGGTCGAC
GAGTTGGAGT TGTCGGTGCG TTCGGCGAAC TGCCTGAAGA ACGATAACAT CGTCTATATC
GGCGACCTGG TGCAGAAGTC GGAAGCGGAA ATGCTGCGCA CCCCGAACTT CGGCCGCAAG
TCGCTCAACG AGATCAAGGA AGTGCTGGCC CAGATGGGTC TGCATCTCGG CATGGAAGTG
CCGGGCTGGC CGCCGGAAAA CATCGACGAA TTGGCCAAGC GCTTCGAGGA TCATTACTGA
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| Protein sequence | MTIQKNWQEL IRPNKLVVTP GSDPTRFATL VAEPLERGFG QTLGNALRRV LLSSLQGAAV
QSVHIDGVLH EFSSIAGVRE DVTDIVLNIK DISIKMQGEG PKRMVVKKQG PGTVTAGDIQ
TVGDVVVLNP DLQICTLDEG AEIRMEFTVA GGKGYVAAER NRPEDAPIGL IPVDSLFSPV
RKVSYKVENT REGQILDYDK LTMTIETNGA ISPDDAVAYA ARILQDQLNV FVNFEEPRKE
VTQEIIPDLA FNPAFLKKVD ELELSVRSAN CLKNDNIVYI GDLVQKSEAE MLRTPNFGRK
SLNEIKEVLA QMGLHLGMEV PGWPPENIDE LAKRFEDHY
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