| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3413 |
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| Symbol | |
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| ID | 3970457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3799041 |
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| End bp | 3801926 |
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| Gene Length | 2886 bp |
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| Protein Length | 961 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637926524 |
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| Product | hypothetical protein |
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| Protein accession | YP_533272 |
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| Protein GI | 90424902 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0649675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.019371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGACG ACCGGGAGTA CCTCAGCCTG CTGCGTCGCA AGGCCGAGCA GATCTTGCGC
AAGAGCCCCG GCATGGAGGG CATGTCGGCG ACGGAAATGC CGGGAGCCGA TCCGGCGACG
GCAACCCTCG CAAGACCGGA GACGGCGTCC CTCGAGGCAG TGGTGCGCTG GTATCGCCCT
GTGCTTGCGG TCACCGACGA TCGTTTCGTG ACCTCCAGCC GGTCGCCCGA CGGCGATCCG
CGATTCCAGG ACCCCAACGA AGCCGCCTCG AAGGCGCTGC TGGCCGAACT GGAGAAGCGA
CGCAGCGTGC TCGATCCGGT GATCCGCTCG GTCGGGCGGA TCGAACTCGT CAACAACGTG
CGCTATCCGT GGGTCGGGAC CGGGTGGATC GTCGGCAGCG ATCTCGGCAG CGACATCATC
GTCACCAACG CCCATGTCGG CAGCGAATTC GGTGCGCGCT CCGGCGCGGG CTACGTGTTT
CGTCCCGGCG TGCCGGACGG CTCGGTGCGG CAATCGGCGC GGATCGATTT CCGCGAGGAA
GTGACCGGCG GCTCGGCGCG CGAATTTCCG ATCACGGAGA TCATCTGGAT CTCCGGCGAC
GACTCACTCG ACATGTGCCT GCTGCGCGTC GCCCGCACCG CCGGGACCGA TCGGATCGAT
CCGCCGGTCA AGCTGTTCAC CGCTCCGCTG AGCGACGACC AGATGGTCGC GGTGATCGGT
TTTCCCGGGT CGAACAACGG CTACGATCCG GCGCCGTTCC AGAAGCTGTT CGGGGCGGTG
ACCGGGAAAA AGCGGTTCTC GCCGGGCTTC TACAGCGGCC GCCGCGGCAG CAGCGCGACC
TATGATTGCT CCACCCTTCC AGGAAGCTCC GGCTCCGTCG TCGTCGACGT GACGACCGGC
CGCGCCGTCG GCCTGCATTT CGCCGGCACG GCGTTCGACA CCAATTACGC GGTGCCGGCG
AGCGATCTGG CGCGCATCCT CCTCAAGCGG CCCTGGCAGA CCGAAGCGGC GGCCCGCTCT
GCCGACACGA CGCGCGCCGC GCCGCCGGCG GCACCTCGCG ACGCTGCGCA ACTGCCGGCG
CCCGCGCTGG CGTCCGCGTT GGCGTCCGAC GGCGCGATCA CCTTCAGCAT TCCGCTGGAG
ATCTCGGTCC GGCTCGGCGG CCTCGCCCGG ACCATCAGCG CAGCATCGGT CGATCCGCCC
GTGGTGCGAG CGGATCAGGC GCCGCCGCGG CGCACCGACC GCGAGGCGGC GACGGCCGCC
GCGGAGACAG TGCGGCAGCA TTTGCTCGGG CAAACGGACG TGCTGTCGGT AAAGGCGGAC
TACCTGTTCA GCAACGGCGT CATCACCGAC GACTTCGGCG TCATCGTCGG CGTCGCCCCC
GGCACCACGA TCGACCCCGC CTCGTTCGAT CTGAAAAGCA CGCAGGACGG CGTGGCCATC
GCGGTGGAAA CCGCCGATCC GCGCACCATC GCCGAGCAGC GTCTCGCGTT CGACACCGAG
TCGTTCGCCG GGCGCCAGGC CAACTACCAG CGCGACCGGA CCGACCCGCG CTTCAACCTC
GATCCGGTCA CCGACGACAT GACGATCCTG CTGCATGTCA GCCCCGAGGC CGGGTGGCCG
GTGCTGCGGC AGTTCCTGGG CGACAAGGAT AGCAATCAGC TCACCATCGG CATGTATCAC
ATGACCGCGC CGCATGTGGT CGAGGCGATC GAGGCGATCG CGCAGCGCGG CGACAGCAAG
ATCGTACTCA CGCTCGACCG CCAGCGCGGC GACGCCGACA TCCCCGACGA TATCGGCGGC
GATACCAAAG CCCAGGACAT TCCGGAAGCC GACACGCTCG ACAACCTCAG CGACATCGCC
GAGACTCGCT TCGCGTGGGC CCCCGCCTCA CTCGGCCGCG GCGGCTTGTT CCCGACCGCC
TATCACATCA AGGTCGCGGT CTGGAGCGCG ACCTCCGGCC GCGACGGACC GACCGACCGG
ATGTTCTGGC TCTCCAGCGG CAACTGGCAA TCCTCCAACC AGGCGCCGAT CGAGCGGAGC
GTCGATGAGA TCGGAGAGGT CACCCAGGAC GAGGTCCAGC GCTACAACCG CGAATGGCAC
GCTCTGGTGA CCCATGCAGG GCTCGCCGCC ACCTTCCGCA ATCATCTCGA ACAGGACTTC
GAGGACAACA GAGCGGCGGC AGAACAAGAG GCGCCGCAGC CGGTGATGCC CGAGGTGCTG
GTTCCGCTCG GCCTGATCGA GGAAGCGCCG CGGGCGCGCG CCTTCAAGCC GTTCAAGCCC
AAGCTCCTGA AAGGCAGGAT CAAGGTCCAG CCGCTGCTGA CGCCGGACAA CTATCCGGAA
GTGATCGTCG AACTGATTTC CAAGGCCAAG CACCGCGTGC TGATCGAGAA TCAGTCGTTC
TCGCTATGGA AGGACATCGC CAGCACGCCC GCGCATTTCC TCGACATCGT CAAAGCGGTG
AAGGACCGCC AGAACAAGAT CCGCGACGTG CGCGTGATCT TCCGCAGCGG CTTCGGCAAC
GAGCGCGATA CGCTGCGGCA GATGAAGACC TTCGGGCTCG AGACCGATGC TGATCACGTC
CGCTACTTCG ACAAGTGCCA CACCAAGGGC ATCGTGATCG ACGACGACAT CGCTGTGCTC
GGCTCGCAGA ACTGGACCGC GGCGGGCACC GGACCCAACC GCGATGCCAG CCTGGTGATC
TGGAACGCCG ACGCCAACGC GTACTTCGCC GAGCTGTTCC AGTACGACTG GGATCAGGTC
GCACGCAATC GCTCGCGCAG CACCGAGAGC ACGTTGCCGA TCAAGGTGGT CAGGGCGGGC
GAAGAGGCCG GGACGCCGCG GGGCTACAGC CGCATATCTC TCGCCGAATT CCTCGGAGAA
ACTTGA
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| Protein sequence | MGDDREYLSL LRRKAEQILR KSPGMEGMSA TEMPGADPAT ATLARPETAS LEAVVRWYRP
VLAVTDDRFV TSSRSPDGDP RFQDPNEAAS KALLAELEKR RSVLDPVIRS VGRIELVNNV
RYPWVGTGWI VGSDLGSDII VTNAHVGSEF GARSGAGYVF RPGVPDGSVR QSARIDFREE
VTGGSAREFP ITEIIWISGD DSLDMCLLRV ARTAGTDRID PPVKLFTAPL SDDQMVAVIG
FPGSNNGYDP APFQKLFGAV TGKKRFSPGF YSGRRGSSAT YDCSTLPGSS GSVVVDVTTG
RAVGLHFAGT AFDTNYAVPA SDLARILLKR PWQTEAAARS ADTTRAAPPA APRDAAQLPA
PALASALASD GAITFSIPLE ISVRLGGLAR TISAASVDPP VVRADQAPPR RTDREAATAA
AETVRQHLLG QTDVLSVKAD YLFSNGVITD DFGVIVGVAP GTTIDPASFD LKSTQDGVAI
AVETADPRTI AEQRLAFDTE SFAGRQANYQ RDRTDPRFNL DPVTDDMTIL LHVSPEAGWP
VLRQFLGDKD SNQLTIGMYH MTAPHVVEAI EAIAQRGDSK IVLTLDRQRG DADIPDDIGG
DTKAQDIPEA DTLDNLSDIA ETRFAWAPAS LGRGGLFPTA YHIKVAVWSA TSGRDGPTDR
MFWLSSGNWQ SSNQAPIERS VDEIGEVTQD EVQRYNREWH ALVTHAGLAA TFRNHLEQDF
EDNRAAAEQE APQPVMPEVL VPLGLIEEAP RARAFKPFKP KLLKGRIKVQ PLLTPDNYPE
VIVELISKAK HRVLIENQSF SLWKDIASTP AHFLDIVKAV KDRQNKIRDV RVIFRSGFGN
ERDTLRQMKT FGLETDADHV RYFDKCHTKG IVIDDDIAVL GSQNWTAAGT GPNRDASLVI
WNADANAYFA ELFQYDWDQV ARNRSRSTES TLPIKVVRAG EEAGTPRGYS RISLAEFLGE
T
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