| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3409 |
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| Symbol | |
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| ID | 3970453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3795269 |
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| End bp | 3795688 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637926520 |
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| Product | hypothetical protein |
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| Protein accession | YP_533268 |
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| Protein GI | 90424898 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0432] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000525529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0925547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGTCGT TCCGCAAGGA ATTGTGGTTT CAAACCCCTG GCCGCCGGGC GTTCATCAAC
ATCACGCCGG AGGTGACCGC CGCGCTGCAC GACAGCGGCG TGCGCGAAGG GCTGCTGCTG
GTCAACGCCA TGCACATCAC CGCCTCGGTG TTCATCAACG ACGACGAGAG CGGGCTGCAC
GCCGACTACG AACTCTGGCT GGAAAAGCTC GCGCCGCACG AGCCGGTGGC GGGCTATCGC
CACAACCGCA CCGGCGAGGA CAATGCCGAC GCCCATATGA AGCGCCAGCT GATGGGCCGC
GAGGTGGTGG TCGCGATCAC CGACGGCAAG CTCGACTTCG GCCCGTGGGA GCAGATTTTT
TACGGCGAGT TCGACGGTGG CCGGCGCAAG CGGGTGTTGA TCAAGATCAT CGGCGAATAG
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| Protein sequence | MKSFRKELWF QTPGRRAFIN ITPEVTAALH DSGVREGLLL VNAMHITASV FINDDESGLH
ADYELWLEKL APHEPVAGYR HNRTGEDNAD AHMKRQLMGR EVVVAITDGK LDFGPWEQIF
YGEFDGGRRK RVLIKIIGE
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