| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3398 |
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| Symbol | |
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| ID | 3970500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3782428 |
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| End bp | 3783246 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637926509 |
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| Product | Beta-lactamase |
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| Protein accession | YP_533257 |
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| Protein GI | 90424887 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2602] Beta-lactamase class D |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.437274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.130069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTCAATC GTCGTCATGC CATCGGCCTG TTCGCGGCCA CCGCCGTCGC TCCGTTGTCG
GCGCGCGCCG AAGTCGCGCC GCCGCGCAGC GAGATCCGCG TCGCGCTGGC CAAGCGTTTC
GCCGATGTCG GCACCGCGGG CACCTTCGTC GGCTACAAGA CCGAGGACTA TCTGATCATC
GCCAGCGATC CCGATCGTTC CGGGCAGGGC TTCCACCCGG CATCGACCTT CAAAATCGCC
CATTCGCTGA TCGCGTTGGA GACCGGCGTG GTCGCCGATC CCGACAAGGA CGTGTTCAAG
TGGGACGGCG TGACGCGCGA CATCGAAGGA TGGAATCGCG ATCACACGCT GCGCTCGGCG
ATCGCCGCCT CCGCGGTGCC GGTGTATCAG GAGATCGCGC GTCGGATCGG CGCGGAGCGG
ATGCAGAAGC ATCTCGATCT GTTCGACTAC GGCAACCGCA ACATCGGCGG CGGCATCGAT
CAGTTCTGGC TCACCGGCGA GCTGCGGATC GATCCGATCC AGCAGATCGA TTTCGTCGAC
CGGCTGCGGC GCGGCGTCTT GCCGATCTCG GCGCGCAGCC AGGATCTGGT CCGCGACATC
CTGCCGGTCG GCAAGGTCGG CGATGCGCTG ATTCGCGCCA AGACCGGGCT GCTCGGCGCC
GAAATCGGCA AACCGACGCT GGGCTGGCTG GTCGGCTGGG CCGAGAAGGG CGGCGCGCAC
ACCGTGTTCG CGCTCAATCT CGACATTCGC GAGCCGCGCC ACGTCGCTCT GCGCATGGCG
CTGGCCGAGC AATGCCTCGG CGATATCGGC GCGATCTGA
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| Protein sequence | MLNRRHAIGL FAATAVAPLS ARAEVAPPRS EIRVALAKRF ADVGTAGTFV GYKTEDYLII
ASDPDRSGQG FHPASTFKIA HSLIALETGV VADPDKDVFK WDGVTRDIEG WNRDHTLRSA
IAASAVPVYQ EIARRIGAER MQKHLDLFDY GNRNIGGGID QFWLTGELRI DPIQQIDFVD
RLRRGVLPIS ARSQDLVRDI LPVGKVGDAL IRAKTGLLGA EIGKPTLGWL VGWAEKGGAH
TVFALNLDIR EPRHVALRMA LAEQCLGDIG AI
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