| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3394 |
|---|
| Symbol | |
|---|
| ID | 3970496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 3778194 |
|---|
| End bp | 3778859 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637926505 |
|---|
| Product | O-methyltransferase family protein |
|---|
| Protein accession | YP_533253 |
|---|
| Protein GI | 90424883 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4122] Predicted O-methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.417662 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGC TGTTGAACGC ACCGCTTGCC CCCCTGCTCG ACCGTCTGTT CGCCGACGCC
GAGGCGACCA CCGCCGCGCT GCGCTCGACC GTCATGCAGA TGCCGGAGCA CGAGCGCGCG
GCGATGATGG CGAGCAAGAC CGATTACCGC GCGCTCTACG CCAGCATGAA GGATGCGCAT
CTGGCGGTGT CGCGGCAGAC CGCGGCGCTG CTCTACATGT TGGCGCGCTC GACCGCCGCG
CGCAGCATCG TCGAATTCGG CACCTCGTTC GGCATTTCGA CCCTGCACCT CGCAGCAGCC
TTGCGCGACA ATGGCGGCGG ACGGCTGATC ACCAGCGAGT TCGAGCCGTC AAAAGTAGCG
CACGCCGGCG CCAACTTCGC AGCCGGCGGG CTGTCCGACC TGATCGAGCT TCGCGAAGGC
GACGCGCTCG AAACGCTGGC GCGCGATCTG CCGGATCAGA TCGATCTCGT GCTGCTCGAC
GGCGCCAAGG GTCTCTATCC GGCGGTGCTC GACCTGCTCG AGCCCCGGCT GCGGCCCGGC
GCGCTGATCC TCGCCGACAA CGCCGACTGG AGCCCGGACT ATCTCGCCCG CGTCCGCTCG
CCCAAGCGCG GCTATCTGTC GACGCCGTTC GCCGAGGATG TCGAACTGTC GATGCGACTC
GGCTGA
|
|---|
| Protein sequence | MTTLLNAPLA PLLDRLFADA EATTAALRST VMQMPEHERA AMMASKTDYR ALYASMKDAH
LAVSRQTAAL LYMLARSTAA RSIVEFGTSF GISTLHLAAA LRDNGGGRLI TSEFEPSKVA
HAGANFAAGG LSDLIELREG DALETLARDL PDQIDLVLLD GAKGLYPAVL DLLEPRLRPG
ALILADNADW SPDYLARVRS PKRGYLSTPF AEDVELSMRL G
|
|---|
| |