Gene RPC_3391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3391 
Symbol 
ID3970493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3775648 
End bp3776658 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content67% 
IMG OID637926502 
Productalpha/beta hydrolase fold 
Protein accessionYP_533250 
Protein GI90424880 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.445153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.48468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGTC GGTTGTTGCC CGCCATCATC GCAACGCTGC TGCTGCTGTC GCCCAGCCCT 
GCGCCGGCGG CCGGCGACGC CGCGCGAGAA CCCTACGGCA TCGACCTGGA AGGCTTCGCC
TATCCCCACC CGGTGCAGTT GCTGCCGCTC GTCAACGACG GCGAACAGCT GCGGATGGCC
TATATGGACG TCGCCCCGAC GCAGCCGAAC GGCCGCACCG TGGTGCTGCT GCACGGCCGG
AATTTCCCGT CGAGCTATTG GGCGCCGGTG ATCAGGACCT TGAGCGAGCA AGGCTACCGC
GTGGTGGTGC CGGACCAGAT CGGCTTCGGC AAATCCTCCA AGCCGGCCGG CGACTTGCAT
TTCGACACGC TGGCCCGCAA CAGCATCGCG CTGCTCGACC ATCTGCAACT CGGCAAGGTC
GACATCGTGG CGCATTCGCT GGGCGGCATG CTCGGCGTGC GGATCGCCCG CGCCACTCCC
GAGCGGATCG CGCATCTGCT GCTGGCCGCG CCGATCGGCC TCGAGGACTA TCGGCTCTAT
GTACCGCCGA CCCCGACCGA GACCATCATC GAGACCGAGG ACAAACTGAC CGCGGAGGGC
TACCGCAAGC AGCTCGAGAC CAATTACGCG CTGAAGCTGC CGCCCGACCA GGTGACGCCG
TTCATCGACG CGCGTTTCAA CATCAAGGGC GCCGCCGACT ATCCGCGCTG GCTGCACGCC
TTCGCAGCCT CAGCGCAGAT GATCTATCGC GAACCGGTGG TGCACGAGAT TCCGCTGATC
ACGGTGCCGA CGCTGTTCGT GATGGGCGCT GACGACCACA ACGCGCCGGG CAAGCCCAGC
GCGCCGGAGG CGCTGCGGCC GAAGATGGGG CAGAATGCGG AACTGGCCAA GGCGCTCGCC
GCCCGGATGC CGAACGCGCG CGCCGAGGTC CTGGCCGACG CCGGGCATCT GGTGTTCCTC
GAGCAGCCCG AGCGATTCGA TCAGCTGATG CTGCAGTTCC TGGCGAAGTA A
 
Protein sequence
MPRRLLPAII ATLLLLSPSP APAAGDAARE PYGIDLEGFA YPHPVQLLPL VNDGEQLRMA 
YMDVAPTQPN GRTVVLLHGR NFPSSYWAPV IRTLSEQGYR VVVPDQIGFG KSSKPAGDLH
FDTLARNSIA LLDHLQLGKV DIVAHSLGGM LGVRIARATP ERIAHLLLAA PIGLEDYRLY
VPPTPTETII ETEDKLTAEG YRKQLETNYA LKLPPDQVTP FIDARFNIKG AADYPRWLHA
FAASAQMIYR EPVVHEIPLI TVPTLFVMGA DDHNAPGKPS APEALRPKMG QNAELAKALA
ARMPNARAEV LADAGHLVFL EQPERFDQLM LQFLAK