| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3387 |
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| Symbol | |
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| ID | 3970489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3770017 |
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| End bp | 3773508 |
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| Gene Length | 3492 bp |
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| Protein Length | 1163 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926498 |
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| Product | indolepyruvate ferredoxin oxidoreductase |
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| Protein accession | YP_533246 |
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| Protein GI | 90424876 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTTGA ACCAAGGTGC GATCAGTCTC GATCAGAAAT ACACCCAAGG CTCGGGACAC
ATCTTCCTCA CCGGGATCCA GGCGCTGGTG CGGCTGCCGA TGGCGCAGAT CCGCCGCGAC
CGCGCCATGG GCCTCAACAC CGCGGGCTTC GTCACCGGCT ATCGCGGTTC GCCGCTCGGC
GGCTACGACC AGCAACTGAT CGCTGCGCGA AAGCATCTCG AACAGTACAA CGTCAAGTTT
CAGCCCGGCG TCAACGAAGA CCTCGCCGCC ACCGCGATCT GGGGCACGCA ACAACTCAAT
TTGTCGCCCG GCGCGCGCCA TGATGGCGTG GTCGGGATCT GGTACGGCAA GGGGCCGGGG
GTCGACCGCT GCGGCGACGT GTTTCGGCAT GCCAACGCCG CGGGTTCTGC CAAGCACGGC
GGCGTGCTGT GCCTCGCCGG CGACGACCAC GGCGCCAAAT CCTCCACCGT GCCGCACCAG
TCCGACCACG CCTTCATGGC GGCGTTGATG CCTTATCTCT ATCCGTCGTC GATCCACGAG
ATCATCGAGA TGGGCCTGTT AGGCATCGCG ATGTCGCGCT ATTCCGGCTG CTGGGTCGGC
ATGAAGGTGA TCACTGAGAC GGTGGAGACC ACCGCCGAGA TCAACCTCAA CGACGAGATG
ACGCCGTTCA TCATCCCCTC GGATTTCCAG ATGCCGCCGG GCGGATTGAA TCTGCGCTGG
CCCGACGACC GCTTCGATCA GGACCGCCGG CTGCAGGACT ACAAGGGTTT TGCCGCGATC
GCTTTCGCGC GCGCCAACAA GATTAATCGC GTCACCATGG ATAGCCCGAA CGCGCGGTTC
GGCATCATGG CGTCGGGCAA GAGCTACGAG GACACCCGCC AGGCGCTGCG CGAACTCGGC
ATCACCGAAC AGGTGGCGGC GCGGATCGGG CTGCGGCTCT ACAAGATCGG CATGCCGTGG
CCGCTGGAGC CGCAGGGCGT GCGCGATCTC GCCCACGGGC TGGAAGAGAT CTTCGTGGTC
GAGGAACGCC GCGAGATCGT CGAGAACCAG GTCAAGCAGG CGCTGTTCAA CGCGCCGGAC
GGCGCGCGGC CGCGCATCGT CGGCAAGATG GACGATCGTG ACCATCGCTT CCTGCCGTTC
GCCGACGAAC TCAGCGTCGC CAAGGTGGCG ACCTCGCTGG TCGACCGGCT GCTGGCGATG
CAGATCGATC CCGAGATCGC GGCGTTGTTG CGCGCCAAGG CGGACTGGTT TCACGGCCGC
GACGCCTCGC AGGTGCAGGC GGTGGTGCCG ATCACCCGCA CGCCGTATTT CTGCTCCGGC
TGTCCGCACA ACACCTCGAC CAAGGTGCCG GAAGGCAGCC GGGCGCTGGC CGGGATCGGT
TGCCACTTCA TGACGCTGTG GATGGACCGC TCGACCTCGA CCTTCACCCA TATGGGCGGC
GAGGGCGTGC CGTGGACCGG CATCGCGCCG TTCACCGACG AAAAGCACAT CTTCGCCAAT
CTCGGCGACG GCACTTACTT CCATTCCGGC AGTCTGGCGA TCCGGCAGTC GATCGCGTCA
AAAGCCAACA TCACCTACAA GATCCTCTAC AACGACGCGG TGGCGATGAC CGGCGGTCAG
CGCCACGACG GCGACCTGTC GCCGCAGCAG ATCACCTTCC AGCTGCACAG CGAAGGCATC
CGCGAGATCG TTCTGGTGTC GGAGAATCCC GACGGCTATC CGGCAGCCAG CATCGCGCCG
GGCACCAAGC TCGCGCATCG CGACGAACTC GACACCGTGA TGAAGACGCT ACGCGAGGTG
AAGGGCGCCT CCGCGATCGT GTTCGTGCAG ACCTGCGCCG CGGAGAAGCG CCGGCGCCGT
AAACGGGGGA CGCTGGAGGA TCCGCAGCGC CGCGTGGTGA TCAACGCCGC CGTCTGCGAA
GGCTGCGGCG ATTGCTCGGT GCAGTCGAAC TGCATTTCGG TGGAGCCGTT GGAAACCGCG
CTCGGCCGCA AGCGCGTCAT CAACCAATCG AGCTGCAACA AGGATTACTC CTGCCTGAAA
GGCTTCTGCC CGTCCTTCGT CACCATCGAA GGCGGCAAAT TGCGCCGCCG CGCCCCGGTC
GATCTGGCTG ACTTTGGTGA ACTGCCGGAG CCGGCCGCGC TGCCCACGCT GGCGCGGCCC
TACAACGTCG CGGTCGGCGG CGTCGGCGGC ACCGGCGTGT TGACCATCGG CGCGCTGCTC
GGCATGGCGG CGCATATCGA GGGCAAGGCC TCGATGATCC TCGACATGTC GGGGCTGGCG
CAAAAAGGCG GCGCGGTGCT CAGCCATGTG CGGCTGTCCG GCAGTCCGGA CGACGTCACC
TGTTCGCGGA TCGTCACCGG CACCGCGGAT CTCCTCATCG TCGCCGACGA GGTGATGGCG
ATTTCCAAGG ATACGCTGTC GTTGTGCGAG CCCGGCCGCA CCCACGGCGT CGTCAACACC
CACCTGATCC CGATCGCGGA TTTCATCCGC AACCGCGATT TCGATTTCCA GAATAGCAAG
GTCAATGGCG TTTTGGCCGC AGCGCTGCGC AAGGAGTCCG CGTTCATCGA CTTCACCAAG
GCGGCGGAAG CGCTGCTCGG GGATTCGATC GCCACCAACA TGATGATGAT GGGCTTTGCC
TATCAACGCG GGTTGTTGCC GCTGCAAGCC GCCTCGATCG AGCAGGCGAT CGAGTTGAAC
GGCGTCTCGA TCAAGATGAA CAGCCAGGCG TTCAAGCTCG GGCGGCTGGC GGCAGCCGAT
CCGGCGCGGC TTGCCGCGAT GCTGCACGGC GCCGACGACA CCGTGGCCGA GAAGACGCTG
GAGGAGATGT CGCTCGACGA GATCATCGTG CATCGCAGCG CGATGCTGAC CGATTACCAA
AACGCCAAGC TCGCCACGCG CTATCGCGCG CTGGTCGATG AGGTCCGCGA CGCAGCCGAG
CGCGGCGGCT ATGGCGAGGC GCTGCCGCGC GCGGTGGCGA TCAACTATGC CAAGCTCTTG
GCCTACAAGG ACGAGTACGA GGTGGCGCGG CTATTGACCG ACAAAGCCTT CGAACACAGC
ATCCATGAGC GGTTCGAGGG CGACTACAAA GTCAATTTCC ATCTGGCGCC GCCGATCCTG
CCAGGGCTCG ACGTCACCGG GCGGCCGAAG AAGCGGCAGT TCGGCGAAGC GATGCGGCCG
TTGTTCAAGA CGCTGGCGAA ATTGCGCGGT TTGCGCGGCA CGCCGTTCGA CCTGTTCGGC
TATCACCCCG AGCGCAAGCT CGAGCGCGAC CTGATCGCCG GCTACGAACG GGACATAGCC
ACCGTGCTGC AGCGGCTGAC ACCGCGTACC GTCTCGTTCG CGGTGGAATT GTTGTCGCTG
CCGGACCGCA TCCGCGGCTA CGGCCCGATC AAGGAGAAGG CGGTGCAGGA CGCCAAGGCG
CGCTACGCCG AACTCGCCCG CGAGATCGCC GATCCGCCGC CGCTGCCGTT GCCGCAACTC
GCCGCGGAGT AG
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| Protein sequence | MGLNQGAISL DQKYTQGSGH IFLTGIQALV RLPMAQIRRD RAMGLNTAGF VTGYRGSPLG
GYDQQLIAAR KHLEQYNVKF QPGVNEDLAA TAIWGTQQLN LSPGARHDGV VGIWYGKGPG
VDRCGDVFRH ANAAGSAKHG GVLCLAGDDH GAKSSTVPHQ SDHAFMAALM PYLYPSSIHE
IIEMGLLGIA MSRYSGCWVG MKVITETVET TAEINLNDEM TPFIIPSDFQ MPPGGLNLRW
PDDRFDQDRR LQDYKGFAAI AFARANKINR VTMDSPNARF GIMASGKSYE DTRQALRELG
ITEQVAARIG LRLYKIGMPW PLEPQGVRDL AHGLEEIFVV EERREIVENQ VKQALFNAPD
GARPRIVGKM DDRDHRFLPF ADELSVAKVA TSLVDRLLAM QIDPEIAALL RAKADWFHGR
DASQVQAVVP ITRTPYFCSG CPHNTSTKVP EGSRALAGIG CHFMTLWMDR STSTFTHMGG
EGVPWTGIAP FTDEKHIFAN LGDGTYFHSG SLAIRQSIAS KANITYKILY NDAVAMTGGQ
RHDGDLSPQQ ITFQLHSEGI REIVLVSENP DGYPAASIAP GTKLAHRDEL DTVMKTLREV
KGASAIVFVQ TCAAEKRRRR KRGTLEDPQR RVVINAAVCE GCGDCSVQSN CISVEPLETA
LGRKRVINQS SCNKDYSCLK GFCPSFVTIE GGKLRRRAPV DLADFGELPE PAALPTLARP
YNVAVGGVGG TGVLTIGALL GMAAHIEGKA SMILDMSGLA QKGGAVLSHV RLSGSPDDVT
CSRIVTGTAD LLIVADEVMA ISKDTLSLCE PGRTHGVVNT HLIPIADFIR NRDFDFQNSK
VNGVLAAALR KESAFIDFTK AAEALLGDSI ATNMMMMGFA YQRGLLPLQA ASIEQAIELN
GVSIKMNSQA FKLGRLAAAD PARLAAMLHG ADDTVAEKTL EEMSLDEIIV HRSAMLTDYQ
NAKLATRYRA LVDEVRDAAE RGGYGEALPR AVAINYAKLL AYKDEYEVAR LLTDKAFEHS
IHERFEGDYK VNFHLAPPIL PGLDVTGRPK KRQFGEAMRP LFKTLAKLRG LRGTPFDLFG
YHPERKLERD LIAGYERDIA TVLQRLTPRT VSFAVELLSL PDRIRGYGPI KEKAVQDAKA
RYAELAREIA DPPPLPLPQL AAE
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