Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3386 |
Symbol | |
ID | 3970488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3768772 |
End bp | 3769632 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637926497 |
Product | MaoC-like dehydratase |
Protein accession | YP_533245 |
Protein GI | 90424875 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.263784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTCG ACTACGACGC CGTGATGGGC CTGAAGCAGT TCGGCCAGCG CTATTCCTGG ACCGATCGCG AGGTGATGCT CTACGCCGTC GGTATCGGCA TCGGCGCCGA TCCGCTGGAC GAGCGCGAAC TCGCCTTCGT CAACGAGGCG ACGTTCACCG CGCGGCCGCT GCAAGTGGTG CCGAGCTTCG CCTCGGTGGC GGCGTGGGGC GCGTCGCCCG GCCCGATCGA GGTCAATCGC GTGCTGGTGG TCGATGGCGA GCGCGACATC ACCTTCCACA AGCCGCTGCC GGCGGCGGCC GACATCACCG CCGATGTCAG CGTGATCGGC CTGTACGACA AGGGCAAGGA CAAGGGCGCG GTGATCATTC GCCAGACCGT GCTGCGCGAC GGGCAGGGCG AGCCGCTGGC GACGCTGAAG GCGTCGCAAT TCGCCCGCGG CGACGGCGGC TTCGGCGGCC CCTCGCAAGG TCAGCCCGAG CCGCATCAGG TGCCGAGCCG CGCGCCGGAT CGCATCATCG ATATCGCGAC GCGGCCGGAT CAGGCGCTGC TGTATCGGCT GTGCGGCGAT CGCAATCCGC TGCATTCCGA TCCGGAGTTC GCGCGCCGCG CCGGTTTTGC GCGGCCGATC CTGCACGGGA TGTGCACCTA CGGCATCACC TGCCGCGGCA TTTTGCAGAC CTATGCCGAT TACGATCCAT CGGCGTTCCG TCAGCACGCC GCACGGTTCT CGGCGCCGGT CTATCCCGGC GACACCGTGA CCATGGAGCT GTGGAAGGAC GGCAACGTGA TTTCGTTCGA GGCCAAGGTG AATGCCCGCG CCGTCACCGT GATCAAGAAC GGCAAGACCG TGCTGGGATA G
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Protein sequence | MPLDYDAVMG LKQFGQRYSW TDREVMLYAV GIGIGADPLD ERELAFVNEA TFTARPLQVV PSFASVAAWG ASPGPIEVNR VLVVDGERDI TFHKPLPAAA DITADVSVIG LYDKGKDKGA VIIRQTVLRD GQGEPLATLK ASQFARGDGG FGGPSQGQPE PHQVPSRAPD RIIDIATRPD QALLYRLCGD RNPLHSDPEF ARRAGFARPI LHGMCTYGIT CRGILQTYAD YDPSAFRQHA ARFSAPVYPG DTVTMELWKD GNVISFEAKV NARAVTVIKN GKTVLG
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