Gene RPC_3386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3386 
Symbol 
ID3970488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3768772 
End bp3769632 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content67% 
IMG OID637926497 
ProductMaoC-like dehydratase 
Protein accessionYP_533245 
Protein GI90424875 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.263784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCG ACTACGACGC CGTGATGGGC CTGAAGCAGT TCGGCCAGCG CTATTCCTGG 
ACCGATCGCG AGGTGATGCT CTACGCCGTC GGTATCGGCA TCGGCGCCGA TCCGCTGGAC
GAGCGCGAAC TCGCCTTCGT CAACGAGGCG ACGTTCACCG CGCGGCCGCT GCAAGTGGTG
CCGAGCTTCG CCTCGGTGGC GGCGTGGGGC GCGTCGCCCG GCCCGATCGA GGTCAATCGC
GTGCTGGTGG TCGATGGCGA GCGCGACATC ACCTTCCACA AGCCGCTGCC GGCGGCGGCC
GACATCACCG CCGATGTCAG CGTGATCGGC CTGTACGACA AGGGCAAGGA CAAGGGCGCG
GTGATCATTC GCCAGACCGT GCTGCGCGAC GGGCAGGGCG AGCCGCTGGC GACGCTGAAG
GCGTCGCAAT TCGCCCGCGG CGACGGCGGC TTCGGCGGCC CCTCGCAAGG TCAGCCCGAG
CCGCATCAGG TGCCGAGCCG CGCGCCGGAT CGCATCATCG ATATCGCGAC GCGGCCGGAT
CAGGCGCTGC TGTATCGGCT GTGCGGCGAT CGCAATCCGC TGCATTCCGA TCCGGAGTTC
GCGCGCCGCG CCGGTTTTGC GCGGCCGATC CTGCACGGGA TGTGCACCTA CGGCATCACC
TGCCGCGGCA TTTTGCAGAC CTATGCCGAT TACGATCCAT CGGCGTTCCG TCAGCACGCC
GCACGGTTCT CGGCGCCGGT CTATCCCGGC GACACCGTGA CCATGGAGCT GTGGAAGGAC
GGCAACGTGA TTTCGTTCGA GGCCAAGGTG AATGCCCGCG CCGTCACCGT GATCAAGAAC
GGCAAGACCG TGCTGGGATA G
 
Protein sequence
MPLDYDAVMG LKQFGQRYSW TDREVMLYAV GIGIGADPLD ERELAFVNEA TFTARPLQVV 
PSFASVAAWG ASPGPIEVNR VLVVDGERDI TFHKPLPAAA DITADVSVIG LYDKGKDKGA
VIIRQTVLRD GQGEPLATLK ASQFARGDGG FGGPSQGQPE PHQVPSRAPD RIIDIATRPD
QALLYRLCGD RNPLHSDPEF ARRAGFARPI LHGMCTYGIT CRGILQTYAD YDPSAFRQHA
ARFSAPVYPG DTVTMELWKD GNVISFEAKV NARAVTVIKN GKTVLG