| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3364 |
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| Symbol | |
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| ID | 3970524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3728174 |
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| End bp | 3730492 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637926476 |
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| Product | cyclic nucleotide-binding domain-containing protein |
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| Protein accession | YP_533224 |
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| Protein GI | 90424854 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.419031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGATCG CCGGGACCGC GGATTCCGCC AGCCAGGCGG CCGCTGGCCT CTCCGCCGCT
GCCCTCGAAC TGAAATGGCA AGAGGCGTCG AACGGCGGTC CGGTCCGCAA AGGACCCGTG
CATCTGGTGA TGTGGGTGGC GCGGGCGGCG GCGCAGCACA GGGTGCTGCT GTTCTGGTTC
CTGCTCGCCA ACGCGGTGCA GATTCTCTAC GCCGTCACCG TGCCGGTGCT GCTGCAGTCG
CTGTTCGACA AGGGCATCAA GCCGAGCGAT GTGGAGGCCA TCAGCCTCTA TCTGGCCTAC
CTCACTTTGG GCTTTCTGGC CGCGTCCGGA TTCGGCGTGG TGCTGGACTA CACGCTGGCC
AAGCTCGGAC CGCGCATCCT CAACGACCTC CGCGAACGGA TGTTTCGCAA GATCAACGCC
ATCGATGCGC GCGAACTGGC CAGCTCCAGC ACCGACGAGA TCATCGCCCA TTTCTCCAAC
GACATCACCG TGGTGGAAAA GGCCGTGATC TGGGCGGTGC CCGGGCTGTT CTCCAAGGGG
CTGATGCTGA TCGGCTCCGT CGTGGTGGCG TTCACGCTGG ACTGGCAATT GGCGATCGTC
ACCCTGGTGA CACTGATCTT CGCGTTCTGG CTGCCGCGCG GCGTCAGCAA GCGCGCCGTG
CGCTACAACT ACGAGCGCGG CGCCAAGGAC GCCAGGCTTG CGCAGATCGT CAAGGAGACG
CTGCTGATGC AGCGGGTGAT CCGCATCTTC GGTCTGCGCG ACTTGCGGTC GACGCTGTTC
GCCGGGCAGA TCGGCCAGGT TTTCACCGCG AGCTACCATC AGTACTTCTC GTCCGGCCTG
GTGGGCCGCC TGACCAGTTT TGGTGTCAGC GCCGCGCAAC TGCTGGTGAT CGGGCTCGGC
GCCGTGCAGT CGGTGGACGG GCTGGTATCG TCCGGCACGA TCGTCGCCTT CATCACGCTG
CTGATCACCA TCGGCGGCGC GGCCGGCTTC ATCGGCGCGC AACTGCCGCT GCTGATTCAG
GGCGTCGGCG GCCTCGAGCG AGCGCAGGAC CTACTCGCCA AGCCCGATGC CGCGCCGGAT
CCGGAACGGC CGGAATCGAT CGGCGGGGTG GTGCATTCGC TGCAATTCGA CGAGGTGAGC
TTCAGCTATG ACGGCAGCAG CCCGGTGCTG GACAAGATCT CGCTGACGAT CGACTGCCCG
CGGCGGGTGA TGGTGGTGGG GCCGTCCGGC TCCGGCAAGT CGACCATCCT GCGCCTGATC
GAGAATCAGT TCTCGCCCGG CAGCGGCCAC GTCCGGTTCA ACGGCGTCGA TCTGCGCCTG
CTCGGCGAAG CGCAGGTCCG CTCGCTGATC TCGCTGGTGC CGCAGGACAC CATGCTGTTC
CAGACCTCGG TGCGGGAGAA CATCCGCATG GGCAAGCTCG ACGCCACCGA TGCCGAAGTG
GAGGCCGCCG CGAAGGCCGC CGACATCCAC CCGATCATCA TGTCGCTGCC CGACGGCTAC
GACACCAATG TGGGCGAGGC CGGCAACAAG CTGTCCGGCG GACAACGTCA ACGCCTCGCC
ATCGCCCGCG CCATCCTGCA CAATCCGCAG ATCATGCTGC TCGACGAGGC CACCTCGGCG
CTCGATCCGG CGAGCCGCGT CGCCGTGGAG GCGACGTTGC GCAAGGTCAC GGCCGGGCGC
ACCGTAGTGT CGGTCACCCA CGACCTCACC CAGTGCGAGC ACGCCGATCT GGTCTATGTG
GTAAAGGCCG GTCGCGTGGT CGAGAGCGGC ACCCATCAGG CGCTGCTGGC CGCCGACGGC
GTCTATGCGG ATCTGTGGCA GCGCAGCGTG ATCGCCGGAG CCGAAGGCGC CGTGCCGCGC
GATCAACTGC TCGACCGGCT GCGCAAGCGT CCCATCCTCA AGGGCGTGCC GGCCGACTTC
GTCGAACGTC TGCTCGCCCG CATGACGGTG GAAGCGGTTG CGCCCGACAC CGTGCTGATC
GAGGACGGCA AGCCGGCCGA CCGCCTGATC GTCATTACTC AGGGCGAGGT GCAGCAGAGC
ATTCGTCTCT CGGATGGCAC GTTCATGGCG GTGGAGGCGC TCGAAGCGGG GGATACGATC
GGCGAATATG CGGCGCTGGA AAACGCCGAA GAGTTCACCC GCGTGGTGAC GCGCAAGGCC
TGCCAACTGT TGACGATCGA TCGCGCGGCG CTGCGGGCGC TGCTCGCCGA GGATCCAGAC
ATCGAGCAAC GGATCGTGAC GATCCTCGCG GCGCGCCATG AAGCCATGAC GCAATATTGC
GCCTGGCAGA CGTTGCAGCA GCATGCGCGA CCGCAATGA
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| Protein sequence | MGIAGTADSA SQAAAGLSAA ALELKWQEAS NGGPVRKGPV HLVMWVARAA AQHRVLLFWF
LLANAVQILY AVTVPVLLQS LFDKGIKPSD VEAISLYLAY LTLGFLAASG FGVVLDYTLA
KLGPRILNDL RERMFRKINA IDARELASSS TDEIIAHFSN DITVVEKAVI WAVPGLFSKG
LMLIGSVVVA FTLDWQLAIV TLVTLIFAFW LPRGVSKRAV RYNYERGAKD ARLAQIVKET
LLMQRVIRIF GLRDLRSTLF AGQIGQVFTA SYHQYFSSGL VGRLTSFGVS AAQLLVIGLG
AVQSVDGLVS SGTIVAFITL LITIGGAAGF IGAQLPLLIQ GVGGLERAQD LLAKPDAAPD
PERPESIGGV VHSLQFDEVS FSYDGSSPVL DKISLTIDCP RRVMVVGPSG SGKSTILRLI
ENQFSPGSGH VRFNGVDLRL LGEAQVRSLI SLVPQDTMLF QTSVRENIRM GKLDATDAEV
EAAAKAADIH PIIMSLPDGY DTNVGEAGNK LSGGQRQRLA IARAILHNPQ IMLLDEATSA
LDPASRVAVE ATLRKVTAGR TVVSVTHDLT QCEHADLVYV VKAGRVVESG THQALLAADG
VYADLWQRSV IAGAEGAVPR DQLLDRLRKR PILKGVPADF VERLLARMTV EAVAPDTVLI
EDGKPADRLI VITQGEVQQS IRLSDGTFMA VEALEAGDTI GEYAALENAE EFTRVVTRKA
CQLLTIDRAA LRALLAEDPD IEQRIVTILA ARHEAMTQYC AWQTLQQHAR PQ
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