| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3363 |
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| Symbol | |
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| ID | 3971078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3726072 |
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| End bp | 3728177 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637926475 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_533223 |
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| Protein GI | 90424853 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.826515 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCCTG ACGCGCCCGC CGGCAGCATT GCCACCCGCC TCGCCGCGCT TGCCGCGGCG
CCCGACAGCC GCTGGACGAT CAGCTTTCTC GATAGCCATG GCGCGGTGGC TGAGCGCTGC
GGCGCGGCGG AGCTGGCGGC GCGGGCCGCC GCGGTGGCGG GCTTCCTGGA ACGGCAGACC
GCGCCGGGCG CGCCGGTGCT GCTAGTGTTC CAGCCTTCGG TCGACTTCCT GGTGGCGTTC
CTCGCCTGCC AGTGGTCGGG ACGGCTCGCC GTGCCGATCA ACCCGCCGCG CCGGCATCGG
CTGATTGAGC GGCTGCAAGC GGTGGCCGCC GACAGCGGCG CCGCGGTGGC GCTGACCGGC
GGCGTGGCGG AGTCGGCGCT GTGGCTGGCG GACAGCGCGG TGCTCGCGGC GATCCGTTGG
CAGGACATCG GCGGCATCGA CAGCGACCCC GCGCTGGCGG GTCCGCTGCG CGAGGTCGAT
CCCGCCGCGA CCTGCTTTAT CCAATACACC TCCGGCTCGA CCGCGCTGCC TAAGGGCGTC
GAGGTCAGCC ATGACAATCT GATGGCGGAT ATGGCGCGGA TGCAGGACGC CTGGGGCCTG
TCGCCATCAA GCACGATGGT GACGTGGTTG CCGGCCTTCC ATGACCTCGG CCTGATCTTC
GGCCTGTTGC AGACGCTGTT CACCGGCTGT CCGGTGGTGC AGATGGCGCC GAACAGTTTT
CTGCAGCGCC CGGTGCTGTG GCTCGAGGCG ATCAGCCGCT TCCGCGGCAC GCACACCGCG
GCGCCCAGTT TCGCCTACGA TCTCTGCAGC CGCCGGATTC CGCCCGAGCA ACGCGAAGGG
CTCGATCTCT CCAGTCTGGT GATGGCGATG AATGCCGCCG AGCCGATCGA TCCGCGGGTG
ATGCAAAACT TCATCGAGAA TTTCGGCCCG CATGGTTTTG ACGACACGAC TTTCGCACCG
GCCTACGGCC TTGCGGAATC CACACTCGCG GTCACTGCGA GCCCCGTCGC TGTGGCGCCA
CGGCTGTTCA CGCTGGATGC GACTGCCCTG GAGGACGGAC GGATCGCTTT CGACGGTGCT
GCGGCCCGAC GGACGGCGAT CGCCGGCTCC GGCACGCCGC TGGCCGACGT CACGATCGCC
ATCGTCGATC CCGAGACCGG ACGTCGTCAG CCTGCCGACC GGGTCGGCGA AATCTGGCTC
GGCGGTCCCA CCATTGCGCG CGGCTACTGG CGCAGGCCGG AAGAAAGTGC TGCGACGTTC
GGCGTTCACA TCGCCGGCGA AGACGACACG ATCGGATATC TTCGCACCGG CGATCTCGGT
GCGATGATCG ATGGCGAACT CTGCGTCACC GGCCGCATCA AGGATCTGAT TATTCTATCG
GGCGCCAATC ACTATCCGCA GGACATCGAG CGAGCGGCGC AGGCCGCTCA TTCGGCGCTG
CGCGTCGACA GCGGCGCCGC GTTCAGCATT GCGGGCGAGC AGGGCGCCGA ACAGGTCGTG
CTGGTGCAGG AGCTGGAGCG CACCCAGCGC CGCAGCGATC CGGCGCCATT GTTCAGCGCG
ATCAGCACGG CGGTCTGGCA GACGCTTGAA CTTCAGTTAT CCCGCATCGT GCTGGTGGAG
CCGGGCGCGG TGCTGCGCAC CTCCAGCGGC AAGATCCAGC GCGCGGCCAA CCGCCAGGCC
TGGCGTGCCG GTGCGCTGCC GGTGATCGCC GAGTGGCGCG TCGCGGGAGA GCAGATTCGT
GAGGTTGCGT CCGGGACTAA CAGCTCGCTG CCGCCGGGTG ACGCGGCGGC GCTAGATCGA
TGGCTGCGCG AGTGGTTTGC GCGGCGGCTC GAACTGCCGC TGGCGGAGGT GCGGGGGGAT
CGCGGCGTCG GCGAACTCGG CCTCACATCG GTCGATGCCG TCGAACTCGC CGGCGCGCTC
GGCGCGCATC TCGGCCGCAA GCTGCCGCAG ACTCTCGCCT ATGATCACCC AACGATCAAC
GCCATGGTGG CGCATCTGTG CGGATCGCCA CCGGCGTCTC CCGCCCCAAG TCCGTCGCCG
CGCGCCGGCG GCGACCTGGA GGAATTGCTA TCGATGATCG AGGGAGGTGG CCGTGGCGAC
CACTGA
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| Protein sequence | MSPDAPAGSI ATRLAALAAA PDSRWTISFL DSHGAVAERC GAAELAARAA AVAGFLERQT
APGAPVLLVF QPSVDFLVAF LACQWSGRLA VPINPPRRHR LIERLQAVAA DSGAAVALTG
GVAESALWLA DSAVLAAIRW QDIGGIDSDP ALAGPLREVD PAATCFIQYT SGSTALPKGV
EVSHDNLMAD MARMQDAWGL SPSSTMVTWL PAFHDLGLIF GLLQTLFTGC PVVQMAPNSF
LQRPVLWLEA ISRFRGTHTA APSFAYDLCS RRIPPEQREG LDLSSLVMAM NAAEPIDPRV
MQNFIENFGP HGFDDTTFAP AYGLAESTLA VTASPVAVAP RLFTLDATAL EDGRIAFDGA
AARRTAIAGS GTPLADVTIA IVDPETGRRQ PADRVGEIWL GGPTIARGYW RRPEESAATF
GVHIAGEDDT IGYLRTGDLG AMIDGELCVT GRIKDLIILS GANHYPQDIE RAAQAAHSAL
RVDSGAAFSI AGEQGAEQVV LVQELERTQR RSDPAPLFSA ISTAVWQTLE LQLSRIVLVE
PGAVLRTSSG KIQRAANRQA WRAGALPVIA EWRVAGEQIR EVASGTNSSL PPGDAAALDR
WLREWFARRL ELPLAEVRGD RGVGELGLTS VDAVELAGAL GAHLGRKLPQ TLAYDHPTIN
AMVAHLCGSP PASPAPSPSP RAGGDLEELL SMIEGGGRGD H
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