| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3356 |
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| Symbol | |
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| ID | 3971070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3710243 |
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| End bp | 3711694 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637926467 |
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| Product | deoxyribodipyrimidine photolyase |
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| Protein accession | YP_533216 |
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| Protein GI | 90424846 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.617341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACG CCCCTGCGCC GATCTCGCTG GTCTGGTTTC GCGACGACCT GCGATTGTCC
GACCACCCCG CACTCGACGA CGCCGGGCGA AGCGGCGCGG CGGTCGTGTG CCTCTACGTG
CTCGACGAAG AGAGCGCCGG ACTGCGGCCG CTCGGCGGCG CCGCGCGCTG GTGGCTGGCG
CAATCGCTGC GCAGCCTCAG CGCCGACCTC GCCGCGCGCG GCGGCGTGCT GATCCTGCGG
CGCGGCCCCG CCGCCCGGAT CGTCGCCGAG GTCGCGCGCG AGGCCGGCGC CGTTCGCGTC
AGTTGGAATG ACGTCCCGAA CCGGCCCGCC CGCGCCGTTG CCGACGACCT CGCCGCGCGG
CTCGGCGATC TCGGCGTCGC CGCGCAATGC TGCCCCGGCG ATCTGTTGGC GGCGCCGGCG
ACGGTCCGAA CGCAGCAAGG CCGCGGCCTC AGGGTGTTCA CGCCGTTCTG GAAACGGGTG
CTTGCGCTTG GCGATCCGCC GCAACCGCTA ACCGCACCGA AAGCTCTCTG CTCTGTCCCA
AGCCTCGCCA GCGACACCCT CGATGACTGG AAGCTCGAGC CGACCCGGCC GGATTGGGCC
GGCGGTTTGC GCGCGCGCTG GCAGCCTGGC GAAGCGGCCG CGCAACGCGG CCTGCAACAC
TTCCTCCACG GCGCCATCGC GGGCTACGCC ACCGAGCGCG ACCGCCCCGA CCGCGTCGCC
ACCTCGACGC TGTCGCCGCA TCTGCGCTTT GGCGAAATCA GTCCGCGGCA GGTCTGGCAC
GCGGCACGGT TCGCAGCAGC CGAGCGCCCG GCGATTGCCG CCGACGTCGA CAAGTTTCTT
AGCGAGTTGG GATGGCGGGA ATTCTGCCGG CACCTGCTGT TCGACAACCC GGACCTTGCG
ACCCGCAACC TGCAGCCGGC GTTCGATCGC TTTCCCTGGA CCACCGACCC GATCGCGTTG
CGCGCCTGGC AGCGAGGCCG CACCGGCTAT CCCCTTGTCG ACGCCGGAAT GCGCGAACTC
CGGCTCACCG GAGTGATGCA CAACCGCGTG CGCATGGTGG CGGCGTCGTT CCTGGTCAAG
CATCTGTTGC TCGACTGGCG CTGCGGCGAA GCCTGGTTCT GGGACACGCT GGTCGATGCC
GATCCCGCCA GCAACCCGGC GAATTGGCAG TGGGTCGCCG GCTGCGGCGC CGATGCCGCA
CCGTATTTCA GGGTGTTCAA TCCGATCCTA CAAGGCGAGA GGTTCGATGC CGAGGGCGAC
TATGTTCGCC GCTTCATCCC GGAAATCGCC GGTCTTTCGA ACAAGTCGAT CCATCAGCCA
TGGACTGCGA CGCCGCTCGA ACTCGAAGCC GCCGGCGTCA CGCTCGGTGA CACCTATCCG
AACCCGATCG TCGATCACCG CGCCGCGCGA CAGCGTGCAC TTGCCGCATA CGCGACTGTG
CGAAACAACT GA
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| Protein sequence | MANAPAPISL VWFRDDLRLS DHPALDDAGR SGAAVVCLYV LDEESAGLRP LGGAARWWLA
QSLRSLSADL AARGGVLILR RGPAARIVAE VAREAGAVRV SWNDVPNRPA RAVADDLAAR
LGDLGVAAQC CPGDLLAAPA TVRTQQGRGL RVFTPFWKRV LALGDPPQPL TAPKALCSVP
SLASDTLDDW KLEPTRPDWA GGLRARWQPG EAAAQRGLQH FLHGAIAGYA TERDRPDRVA
TSTLSPHLRF GEISPRQVWH AARFAAAERP AIAADVDKFL SELGWREFCR HLLFDNPDLA
TRNLQPAFDR FPWTTDPIAL RAWQRGRTGY PLVDAGMREL RLTGVMHNRV RMVAASFLVK
HLLLDWRCGE AWFWDTLVDA DPASNPANWQ WVAGCGADAA PYFRVFNPIL QGERFDAEGD
YVRRFIPEIA GLSNKSIHQP WTATPLELEA AGVTLGDTYP NPIVDHRAAR QRALAAYATV
RNN
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